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2
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PLoS One. 2019 Sep 30;14(9):e0222906. doi: 10.1371/journal.pone.0222906. eCollection 2019.
3
From noise to knowledge: how randomness generates novel phenomena and reveals information.从噪声中获取知识:随机如何产生新现象并揭示信息。
Ecol Lett. 2018 Aug;21(8):1255-1267. doi: 10.1111/ele.13085. Epub 2018 May 22.
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Data-driven discovery of partial differential equations.基于数据驱动的偏微分方程发现。
Sci Adv. 2017 Apr 26;3(4):e1602614. doi: 10.1126/sciadv.1602614. eCollection 2017 Apr.
5
Ontogeny of collective behavior reveals a simple attraction rule.集体行为的个体发生揭示了一个简单的吸引规则。
Proc Natl Acad Sci U S A. 2017 Feb 28;114(9):2295-2300. doi: 10.1073/pnas.1616926114. Epub 2017 Feb 13.
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Understanding how animal groups achieve coordinated movement.了解动物群体如何实现协调运动。
J Exp Biol. 2016 Oct 1;219(Pt 19):2971-2983. doi: 10.1242/jeb.129411.
7
Onset of collective motion in locusts is captured by a minimal model.蝗虫群体运动的起始由一个极简模型捕捉到。
Phys Rev E Stat Nonlin Soft Matter Phys. 2015;92(5):052708. doi: 10.1103/PhysRevE.92.052708. Epub 2015 Nov 6.
8
Inherent noise appears as a Lévy walk in fish schools.内在噪声在鱼群中表现为 Lévy 游走。
Sci Rep. 2015 Jun 3;5:10605. doi: 10.1038/srep10605.
9
From phase to microphase separation in flocking models: the essential role of nonequilibrium fluctuations.从群聚模型中的相分离到微相分离:非平衡涨落的关键作用
Phys Rev Lett. 2015 Feb 13;114(6):068101. doi: 10.1103/PhysRevLett.114.068101. Epub 2015 Feb 12.
10
Noise-induced bistable states and their mean switching time in foraging colonies.觅食群体中的噪声诱导双稳态及其平均切换时间。
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噪声诱导的集体动力学效应及从数据推断局部相互作用。

Noise-induced effects in collective dynamics and inferring local interactions from data.

机构信息

Centre for Ecological Sciences, Indian Institute of Science, Bengaluru 560012, India.

出版信息

Philos Trans R Soc Lond B Biol Sci. 2020 Sep 14;375(1807):20190381. doi: 10.1098/rstb.2019.0381. Epub 2020 Jul 27.

DOI:10.1098/rstb.2019.0381
PMID:32713307
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7423372/
Abstract

In animal groups, individual decisions are best characterized by probabilistic rules. Furthermore, animals of many species live in small groups. Probabilistic interactions among small numbers of individuals lead to a so-called at the group level. Theory predicts that the strength of intrinsic noise is not a constant but often depends on the collective state of the group; hence, it is also called a or a . Surprisingly, such noise may produce collective order. However, only a few empirical studies on collective behaviour have paid attention to such effects owing to the lack of methods that enable us to connect data with theory. Here, we demonstrate a method to characterize the role of stochasticity directly from high-resolution time-series data of collective dynamics. We do this by employing two well-studied individual-based toy models of collective behaviour. We argue that the group-level noise may encode important information about the underlying processes at the individual scale. In summary, we describe a method that enables us to establish connections between empirical data of animal (or cellular) collectives and the phenomenon of noise-induced states, a field that is otherwise largely limited to the theoretical literature. This article is part of the theme issue 'Multi-scale analysis and modelling of collective migration in biological systems'.

摘要

在动物群体中,个体决策最好用概率规则来描述。此外,许多物种的动物都生活在小群体中。小群体中个体之间的概率相互作用导致了所谓的群体层面的。理论预测,内在噪声的强度不是一个常数,而是经常取决于群体的集体状态;因此,它也被称为或。令人惊讶的是,这种噪声可能会产生集体秩序。然而,由于缺乏将数据与理论联系起来的方法,只有少数关于集体行为的实证研究关注到了这种效应。在这里,我们展示了一种从集体动力学的高分辨率时间序列数据中直接描述随机性作用的方法。我们通过使用两个经过充分研究的集体行为的基于个体的玩具模型来实现这一点。我们认为,群体层面的噪声可能编码了关于个体尺度下潜在过程的重要信息。总之,我们描述了一种方法,使我们能够在动物(或细胞)群体的经验数据和噪声诱导状态现象之间建立联系,而这个领域在很大程度上仅限于理论文献。本文是主题为“生物系统中集体迁移的多尺度分析和建模”的一部分。