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泰国广泛耐药 株的分子流行病学、抗菌耐药性和毒力基因研究进展

Insight into Molecular Epidemiology, Antimicrobial Resistance, and Virulence Genes of Extensively Drug-Resistant in Thailand.

机构信息

Department of Microbiology and Parasitology, Faculty of Medical Science, Naresuan University, Phitsanulok, Thailand.

Faculty of Oriental Medicine, Chiang Rai College, Chiang Rai, Thailand.

出版信息

Microb Drug Resist. 2021 Mar;27(3):350-359. doi: 10.1089/mdr.2020.0064. Epub 2020 Jul 23.

DOI:10.1089/mdr.2020.0064
PMID:32716693
Abstract

Extensively drug-resistant (XDR-AB) is a major threat to public health worldwide. A retrospective study for 27 XDR-AB isolates from four tertiary hospitals in Thailand was conducted. Beta-lactamase and virulence genes were characterized by PCR. The , , and were detected in all isolates, whereas and genes were present in 7.4% and 3.7% of isolates. All isolates had virulence genes, including genes in iron acquisition system, biofilm formation and secretion systems. The plasmids in XDR-AB belonged to GR2 (100%), GR6 (40.7%), and GR1 (7.4%). Multilocus sequence typing sequence types (STs) were further investigated. The data demonstrated that XDR-AB isolates had nine STs: ST195 ( = 4), ST208 ( = 4), ST368 ( = 1), ST451 ( = 5), ST457 ( = 2), ST1947 ( = 1), ST1166 ( = 7), including two novel STs namely ST1682 ( = 2) and ST1684 ( = 1). We observed that the majority ST1166 (25.9%) was associated with the prevalence of GR2 and GR6 plasmids and a virulence gene. Genome-based single nucleotide polymorphism phylogenetic analysis of the isolates with two novel ST types indicated that the two isolates belonged to the international clone II (IC2) within the same cluster. In conclusion, our data showed the dissemination of XDR-AB isolates harbored virulence genes and antibiotic resistance genes among four hospitals in Thailand. The results highlighted the difficulty posed for the empirical treatment of the patients with the infection.

摘要

广泛耐药 (XDR-AB) 是全球公共卫生的主要威胁。对泰国四家三级医院的 27 株 XDR-AB 分离株进行了回顾性研究。通过 PCR 对β-内酰胺酶和毒力基因进行了特征分析。所有分离株均检测到 、 和 ,而 和 基因在 7.4%和 3.7%的分离株中存在。所有分离株均具有毒力基因,包括铁摄取系统、生物膜形成和分泌系统的基因。XDR-AB 中的质粒属于 GR2(100%)、GR6(40.7%)和 GR1(7.4%)。进一步研究了多位点序列分型序列类型(STs)。数据表明,XDR-AB 分离株有 9 种 STs:ST195( = 4)、ST208( = 4)、ST368( = 1)、ST451( = 5)、ST457( = 2)、ST1947( = 1)、ST1166( = 7),包括两种新的 STs,即 ST1682( = 2)和 ST1684( = 1)。我们观察到,大多数 ST1166(25.9%)与 GR2 和 GR6 质粒和毒力基因的流行有关。对两种新型 ST 类型的分离株进行基于基因组的单核苷酸多态性系统发育分析表明,这两种分离株属于同一簇内的国际克隆 II(IC2)。总之,我们的数据表明,泰国四家医院的 XDR-AB 分离株携带毒力基因和抗生素耐药基因。结果突出了 感染患者经验性治疗的困难。

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