• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

从土壤细菌的基因组数据中鉴定新型环氧化物水解酶及其催化特性。

Identification and catalytic properties of new epoxide hydrolases from the genomic data of soil bacteria.

机构信息

Department of Biochemical Engineering, University College London, Bernard Katz, London WC1E 6BT, UK.

Department of Chemistry, University College London, 20 Gordon Street, London, WC1H 0AJ, UK.

出版信息

Enzyme Microb Technol. 2020 Sep;139:109592. doi: 10.1016/j.enzmictec.2020.109592. Epub 2020 May 12.

DOI:10.1016/j.enzmictec.2020.109592
PMID:32732040
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7429986/
Abstract

Epoxide hydrolases (EHs) catalyse the conversion of epoxides into vicinal diols. These enzymes have extensive value in biocatalysis as they can generate enantiopure epoxides and diols which are important and versatile synthetic intermediates for the fine chemical and pharmaceutical industries. Despite these benefits, they have seen limited use in the bioindustry and novel EHs continue to be reported in the literature. We identified twenty-nine putative EHs within the genomes of soil bacteria. Eight of these EHs were explored in terms of their activity. Two limonene epoxide hydrolases (LEHs) and one ⍺/β EH were active on a model compound styrene oxide and its ring-substituted derivatives, with low to good percentage conversions of 18-86%. Further exploration of the substrate scope with enantiopure (R)-styrene oxide and (S)-styrene oxide, showed different epoxide ring opening regioselectivities. Two enzymes, expressed from plasmids pQR1984 and pQR1990 de-symmetrised the meso-epoxide cyclohexene oxide, forming the (R,R)-diol with high enantioselectivity. Two LEHs, from plasmids pQR1980 and pQR1982 catalysed the hydrolysis of (+) and (-) limonene oxide, with diastereomeric preference for the (1S,2S,4R)- and (1R,2R,4S)-diol products, respectively. The enzyme from plasmid pQR1982 had a good substrate scope for a LEH, being active towards styrene oxide, its analogues, cyclohexene oxide and 1,2-epoxyhexane in addition to (±)-limonene oxide. The enzymes from plasmids pQR1982 and pQR1984 had good substrate scopes and their enzymatic properties were characterised with respect to styrene oxide. They had comparable temperature optima and pQR1984 had 70% activity in the presence of 40% of the green solvent MeOH, a useful property for bio-industrial applications. Overall, this study has provided novel EHs with potential value in industrial biocatalysis.

摘要

环氧化物水解酶(EHs)催化环氧化物转化为顺式二醇。这些酶在生物催化中具有广泛的应用价值,因为它们可以生成手性纯的环氧化物和二醇,这些都是精细化工和制药行业重要且用途广泛的合成中间体。尽管具有这些优势,但它们在生物工业中的应用仍然有限,并且新的 EHs 仍在文献中不断报道。我们在土壤细菌的基因组中鉴定了 29 种推定的 EHs。其中 8 种 EHs 的活性得到了研究。两种柠檬烯环氧化物水解酶(LEHs)和一种 α/β EH 对模型化合物苯乙烯氧化物及其环取代衍生物具有活性,转化率为 18-86%。进一步用对映体纯的(R)-苯乙烯氧化物和(S)-苯乙烯氧化物探索了它们的底物范围,显示出不同的环氧化物开环区域选择性。两种酶,分别来自质粒 pQR1984 和 pQR1990,不对称地拆分了内消旋环氧环己烯氧化物,形成了具有高对映选择性的(R,R)-二醇。两种来自质粒 pQR1980 和 pQR1982 的 LEHs 催化了(+)和(-)柠檬烯氧化物的水解,对(1S,2S,4R)-和(1R,2R,4S)-二醇产物具有非对映选择性。来自质粒 pQR1982 的酶对 LEH 具有良好的底物范围,对苯乙烯氧化物、其类似物、环氧环己烯氧化物和 1,2-环氧己烷以及(±)-柠檬烯氧化物均具有活性。来自质粒 pQR1982 和 pQR1984 的酶具有良好的底物范围,其酶学性质已针对苯乙烯氧化物进行了表征。它们具有相似的最适温度,并且在 40%的绿色溶剂甲醇存在下,质粒 pQR1984 的活性为 70%,这是生物工业应用的有用特性。总的来说,这项研究提供了具有工业生物催化潜在价值的新型 EHs。

相似文献

1
Identification and catalytic properties of new epoxide hydrolases from the genomic data of soil bacteria.从土壤细菌的基因组数据中鉴定新型环氧化物水解酶及其催化特性。
Enzyme Microb Technol. 2020 Sep;139:109592. doi: 10.1016/j.enzmictec.2020.109592. Epub 2020 May 12.
2
An Overview on the Enhancement of Enantioselectivity and Stability of Microbial Epoxide Hydrolases.微生物环氧化物水解酶对映体选择性和稳定性增强的概述
Mol Biotechnol. 2017 Mar;59(2-3):98-116. doi: 10.1007/s12033-017-9996-8.
3
Studies on the Catalytic Promiscuity of Limonene Epoxide Hydrolases in the Non-hydrolytic Ring Opening of 1,2-Epoxides.关于柠檬烯环氧化物水解酶在 1,2-环氧化物非水解开环中催化混杂作用的研究。
Chembiochem. 2020 Jul 1;21(13):1868-1874. doi: 10.1002/cbic.201900694. Epub 2020 Mar 30.
4
Discovery and characterization of thermophilic limonene-1,2-epoxide hydrolases from hot spring metagenomic libraries.从温泉宏基因组文库中发现并鉴定嗜热柠檬烯-1,2-环氧水解酶
FEBS J. 2015 Aug;282(15):2879-94. doi: 10.1111/febs.13328. Epub 2015 Jun 16.
5
Trigger factor assisted folding of the recombinant epoxide hydrolases identified from C. pelagibacter and S. nassauensis.触发因子辅助从嗜 pelagibacter 菌和拿骚链霉菌中鉴定出的重组环氧化物水解酶的折叠。
Protein Expr Purif. 2014 Dec;104:71-84. doi: 10.1016/j.pep.2014.09.004. Epub 2014 Sep 16.
6
Biochemical characterization and transcriptional analysis of the epoxide hydrolase from white-rot fungus Phanerochaete chrysosporium.白腐真菌黄孢原毛平革菌环氧化物水解酶的生化特性及转录分析
Acta Biochim Biophys Sin (Shanghai). 2009 Aug;41(8):638-47. doi: 10.1093/abbs/gmp052.
7
Stereochemical aspects in the 4-vinylcyclohexene biotransformation with rat liver microsomes and purified p450s. monoepoxides and diols.大鼠肝脏微粒体和纯化的细胞色素P450对4-乙烯基环己烯进行生物转化过程中的立体化学方面。单环氧化物和二醇。
Chem Res Toxicol. 2001 May;14(5):492-9. doi: 10.1021/tx000255q.
8
Biotechnological production of enantiopure epoxides by enzymatic kinetic resolution.通过酶促动力学拆分法对映体纯环氧化物的生物技术生产。
Appl Microbiol Biotechnol. 2009 Aug;84(2):239-47. doi: 10.1007/s00253-009-2110-9. Epub 2009 Jul 10.
9
Predictive model for epoxide hydrolase-generated stereochemistry in the biosynthesis of nine-membered enediyne antitumor antibiotics.预测环氧化物水解酶在九元烯二炔抗肿瘤抗生素生物合成中生成的立体化学模型。
Biochemistry. 2013 Aug 6;52(31):5217-24. doi: 10.1021/bi400572a. Epub 2013 Jul 23.
10
Exploring the origins of selectivity in soluble epoxide hydrolase from Bacillus megaterium.探索巨大芽孢杆菌可溶性环氧化物水解酶选择性的起源。
Org Biomol Chem. 2017 Oct 25;15(41):8827-8835. doi: 10.1039/c7ob01847a.

引用本文的文献

1
The Impact of Metagenomics on Biocatalysis.宏基因组学对生物催化的影响。
Angew Chem Int Ed Engl. 2024 May 21;63(21):e202402316. doi: 10.1002/anie.202402316. Epub 2024 Apr 3.
2
Comparative sequence analysis of pPATH pathogenicity plasmids in gall-forming bacteria.致瘤细菌中pPATH致病性质粒的比较序列分析
Front Plant Sci. 2023 Jul 31;14:1198160. doi: 10.3389/fpls.2023.1198160. eCollection 2023.
3
Epoxide Hydrolases: Multipotential Biocatalysts.环氧化物水解酶:多功能生物催化剂。

本文引用的文献

1
Microbiological Transformations 43. Epoxide Hydrolases as Tools for the Synthesis of Enantiopure α-Methylstyrene Oxides:  A New and Efficient Synthesis of ()-Ibuprofen.微生物转化43. 环氧水解酶作为合成对映体纯α-甲基苯乙烯氧化物的工具:(+)-布洛芬的一种新的高效合成方法。
J Org Chem. 1999 Jul 9;64(14):5029-5035. doi: 10.1021/jo982101+.
2
The identification and use of robust transaminases from a domestic drain metagenome.从家庭排水宏基因组中鉴定和利用强大的转氨酶。
Green Chem. 2019 Jan 7;21(1):75-86. doi: 10.1039/c8gc02986e. Epub 2018 Nov 15.
3
New Thermophilic α/β Class Epoxide Hydrolases Found in Metagenomes From Hot Environments.
Int J Mol Sci. 2023 Apr 15;24(8):7334. doi: 10.3390/ijms24087334.
在来自炎热环境的宏基因组中发现的新型嗜热α/β类环氧水解酶
Front Bioeng Biotechnol. 2018 Oct 16;6:144. doi: 10.3389/fbioe.2018.00144. eCollection 2018.
4
Novel extremophilic proteases from Pseudomonas aeruginosa M211 and their application in the hydrolysis of dried distiller's grain with solubles.铜绿假单胞菌 M211 中的新型嗜极端蛋白酶及其在水解干酒糟及其可溶物中的应用。
Biotechnol Prog. 2019 Jan;35(1):e2728. doi: 10.1002/btpr.2728. Epub 2018 Oct 22.
5
Draft Genome Sequences of Three Terrestrial Isoprene-Degrading Strains.三株陆地异戊二烯降解菌株的基因组序列草图
Genome Announc. 2017 Nov 9;5(45):e01256-17. doi: 10.1128/genomeA.01256-17.
6
Structure of a soluble epoxide hydrolase identified in Trichoderma reesei.在里氏木霉中鉴定出一种可溶性环氧水解酶的结构。
Biochim Biophys Acta Proteins Proteom. 2017 Aug;1865(8):1039-1045. doi: 10.1016/j.bbapap.2017.05.004. Epub 2017 May 11.
7
Visualizing the Mechanism of Epoxide Hydrolysis by the Bacterial Virulence Enzyme Cif.可视化细菌毒力酶Cif催化环氧化物水解的机制
Biochemistry. 2016 Feb 9;55(5):788-97. doi: 10.1021/acs.biochem.5b01229. Epub 2016 Jan 22.
8
Structurally Defined Molecular Hypervalent Iodine Catalysts for Intermolecular Enantioselective Reactions.用于分子间对映选择性反应的结构明确的分子高价碘催化剂。
Angew Chem Int Ed Engl. 2016 Jan 4;55(1):413-7. doi: 10.1002/anie.201507180. Epub 2015 Nov 24.
9
Elicitation of secondary metabolism in actinomycetes.放线菌次生代谢产物的诱导。
Biotechnol Adv. 2015 Nov 1;33(6 Pt 1):798-811. doi: 10.1016/j.biotechadv.2015.06.003. Epub 2015 Jun 15.
10
Discovery and characterization of thermophilic limonene-1,2-epoxide hydrolases from hot spring metagenomic libraries.从温泉宏基因组文库中发现并鉴定嗜热柠檬烯-1,2-环氧水解酶
FEBS J. 2015 Aug;282(15):2879-94. doi: 10.1111/febs.13328. Epub 2015 Jun 16.