Bioconversion Group, Research Institute for Sustainable Chemistry, National Institute of Advanced Industrial Science and Technology (AIST), 3-11-32 Kagamiyama, Higashi-Hiroshima, Hiroshima 739-0046, Japan.
Acta Crystallogr F Struct Biol Commun. 2020 Aug 1;76(Pt 8):341-349. doi: 10.1107/S2053230X20009024. Epub 2020 Jul 28.
GH30-7 endoxylanase C from the cellulolytic fungus Talaromyces cellulolyticus (TcXyn30C) belongs to glycoside hydrolase family 30 subfamily 7, and specifically releases 2-(4-O-methyl-α-D-glucuronosyl)-xylobiose from glucuronoxylan, as well as various arabino-xylooligosaccharides from arabinoxylan. TcXyn30C has a modular structure consisting of a catalytic domain and a C-terminal cellulose-binding module 1 (CBM1). In this study, the crystal structure of a TcXyn30C mutant which lacks the CBM1 domain was determined at 1.65 Å resolution. The structure of the active site of TcXyn30C was compared with that of the bifunctional GH30-7 xylanase B from T. cellulolyticus (TcXyn30B), which exhibits glucuronoxylanase and xylobiohydrolase activities. The results revealed that TcXyn30C has a conserved structural feature for recognizing the 4-O-methyl-α-D-glucuronic acid (MeGlcA) substituent in subsite -2b. Additionally, the results demonstrated that Phe47 contributes significantly to catalysis by TcXyn30C. Phe47 is located in subsite -2b and also near the C-3 hydroxyl group of a xylose residue in subsite -2a. Substitution of Phe47 with an arginine residue caused a remarkable decrease in the catalytic efficiency towards arabinoxylan, suggesting the importance of Phe47 in arabinoxylan hydrolysis. These findings indicate that subsite -2b of TcXyn30C has unique structural features that interact with arabinofuranose and MeGlcA substituents.
来自纤维素分解真菌塔宾曲霉(Talaromyces cellulolyticus)的 GH30-7 内切木聚糖酶 GH30-7 endoxylanase C(TcXyn30C)属于糖苷水解酶家族 30 亚家族 7,它能从木聚糖上特异性地释放 2-(4-O-甲基-α-D-葡萄糖醛酸基)-木二糖,也能从阿拉伯木聚糖上释放各种阿拉伯糖-木低聚糖。TcXyn30C 具有模块化结构,由一个催化结构域和一个 C 端纤维素结合模块 1(CBM1)组成。在这项研究中,缺失了 CBM1 结构域的 TcXyn30C 突变体的晶体结构被解析到了 1.65 Å 的分辨率。与具有木聚糖酶和木二糖水解酶活性的塔宾曲霉 GH30-7 木聚糖酶 B(TcXyn30B)的活性位点结构进行比较,结果表明 TcXyn30C 具有识别结合在 -2b 亚位点上的 4-O-甲基-α-D-葡萄糖醛酸(MeGlcA)取代基的保守结构特征。此外,研究结果表明苯丙氨酸 47 对 TcXyn30C 的催化作用有重要贡献。苯丙氨酸 47 位于 -2b 亚位点,也靠近 -2a 亚位点中木糖残基的 C-3 羟基。用精氨酸取代苯丙氨酸 47 会导致对阿拉伯木聚糖的催化效率显著降低,这表明苯丙氨酸 47 在阿拉伯木聚糖水解中的重要性。这些发现表明 TcXyn30C 的 -2b 亚位点具有与阿拉伯呋喃糖和 MeGlcA 取代基相互作用的独特结构特征。