印度感染卡文迪什（AAA）组香蕉的 f. sp. 热带种 4 号菌株的基因组草案。
Draft Genome of f. sp. Strain Tropical Race-4 Infecting Cavendish (AAA) Group of Banana in India.
机构信息
ICAR-National Research Centre for Banana, Tiruchirappalli 620 102, India.
出版信息
Plant Dis. 2021 Feb;105(2):481-483. doi: 10.1094/PDIS-06-20-1170-A. Epub 2020 Dec 9.
Fusarium wilt, caused by the fungus f. sp. , is the most serious pandemic disease of banana. In this study, we report the draft genome of f. sp. vegetative compatibility group (VCG) 01213/16 of strain tropical race 4 (TR4) that infects the Cavendish (AAA) group of banana collected from the subtropical region in India. The genome assembly of TR4 comprises 47,384,463 bp with 4,034 contigs and 15,508 protein-coding regions. Based on VCG analysis, the fungal isolate belongs to f. sp. TR4 but the genome sequence of TR4 shows differences in secreted-in-xylem (SIX) protein gene clusters (specifically, SIX8) in comparison with the reference genome of f. sp. and f. sp. TR4.
枯萎病（ Fusarium wilt ）由真菌 f. sp. 引起，是香蕉最严重的流行性病。在本研究中，我们报告了热带 4 号（TR4）菌株的无性亲和群（VCG）01213/16 的草案基因组，该菌株感染来自印度亚热带地区的 Cavendish （AAA）组香蕉。TR4 的基因组组装由 47,384,463 bp 组成，有 4,034 个连续体和 15,508 个蛋白质编码区。基于 VCG 分析，该真菌分离株属于 f. sp. TR4，但与 f. sp. 和 f. sp. 的参考基因组相比，TR4 的基因组序列在木质部分泌蛋白（SIX）基因簇（特别是 SIX8）方面存在差异。
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