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脯氨酰肽键异构化在人半乳糖凝集素-7 中调节单体-二聚体平衡以影响功能。

Pro4 prolyl peptide bond isomerization in human galectin-7 modulates the monomer-dimer equilibrum to affect function.

机构信息

Department of Biochemistry, Molecular Biology and Biophysics, University of Minnesota, Minneapolis, MN 55455 U.S.A.

Department of Biochemistry, CARIM, University of Maastricht, Maastricht, The Netherlands.

出版信息

Biochem J. 2020 Sep 18;477(17):3147-3165. doi: 10.1042/BCJ20200499.

DOI:10.1042/BCJ20200499
PMID:32766716
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7473712/
Abstract

Human galectin-7 (Gal-7; also termed p53-induced gene 1 product) is a multifunctional effector by productive pairing with distinct glycoconjugates and protein counter-receptors in the cytoplasm and nucleus, as well as on the cell surface. Its structural analysis by NMR spectroscopy detected doubling of a set of particular resonances, an indicator of Gal-7 existing in two conformational states in slow exchange on the chemical shift time scale. Structural positioning of this set of amino acids around the P4 residue and loss of this phenomenon in the bioactive P4L mutant indicated cis-trans isomerization at this site. Respective resonance assignments confirmed our proposal of two Gal-7 conformers. Mapping hydrogen bonds and considering van der Waals interactions in molecular dynamics simulations revealed a structural difference for the N-terminal peptide, with the trans-state being more exposed to solvent and more mobile than the cis-state. Affinity for lactose or glycan-inhibitable neuroblastoma cell surface contact formation was not affected, because both conformers associated with an overall increase in order parameters (S2). At low µM concentrations, homodimer dissociation is more favored for the cis-state of the protein than its trans-state. These findings give direction to mapping binding sites for protein counter-receptors of Gal-7, such as Bcl-2, JNK1, p53 or Smad3, and to run functional assays at low concentration to test the hypothesis that this isomerization process provides a (patho)physiologically important molecular switch for Gal-7.

摘要

人半乳糖凝集素-7(Gal-7;也称为 p53 诱导基因 1 产物)是一种多功能效应物,可通过与细胞质和细胞核中以及细胞表面上的不同糖缀合物和蛋白质反向受体进行有生产性的配对来发挥作用。通过 NMR 光谱学对其结构进行分析,检测到一组特定共振的加倍,这表明 Gal-7 在化学位移时间尺度上以缓慢交换的形式存在于两种构象状态中。该组氨基酸在 P4 残基周围的结构定位以及在具有生物活性的 P4L 突变体中失去这种现象表明该位点发生顺反异构化。各自的共振分配证实了我们对两种 Gal-7 构象的提议。氢键映射和考虑分子动力学模拟中的范德华相互作用表明 N 端肽存在结构差异,反式状态比顺式状态更暴露于溶剂且更具流动性。对乳糖或糖抑制性神经母细胞瘤细胞表面接触形成的亲和力没有影响,因为两种构象都与总体有序参数(S2)的增加有关。在低微摩尔浓度下,蛋白顺式状态的同源二聚体解离比其反式状态更有利。这些发现为 Gal-7 的蛋白质反向受体(如 Bcl-2、JNK1、p53 或 Smad3)的结合位点作图提供了方向,并在低浓度下进行功能测定以测试该异构化过程是否为 Gal-7 提供了(病理)生理上重要的分子开关的假设。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b16d/7473712/0fc584699623/BCJ-477-3147-g0008.jpg
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