Ozhegov G D, Pavlova A S, Zhuravleva D E, Gogoleva N E, Shagimardanova E I, Markelova M I, Yarullina D R, Kayumov A R
Kazan Federal University, Kazan, Russia.
Friedrich-Alexander University Erlangen, Nürnberg, Germany.
Data Brief. 2020 Aug 1;32:106105. doi: 10.1016/j.dib.2020.106105. eCollection 2020 Oct.
Here we report the whole genome sequence of HFD1 strain, the producer of antibacterial peptides. The genome consists of one circular chromosome with 2101878 bp in length and GC-content of 51.8%, and includes linear DNA with 5386 bp in length with 100% identity to bacteriophage phiX174. The analysis of the genome has revealed 2049 genes encoding for proteins including 867 proteins without known function and 70 genes encoding for RNAs (10 rRNAs, 59 tRNAs and 1 tmRNA). Putative genes responsible for the biosynthesis of 4 antimicrobial peptides were identified. The NCBI Bioproject has been deposited at NCBI under the accession number PRJNA615901 (https://www.ncbi.nlm.nih.gov/bioproject/PRJNA615901/) and consist of full annotated genome and raw sequence data.
在此，我们报告了抗菌肽产生菌HFD1菌株的全基因组序列。该基因组由一条长度为2101878 bp、GC含量为51.8%的环状染色体组成，还包括一段长度为5386 bp的线性DNA，其与噬菌体phiX174具有100%的同源性。基因组分析揭示了2049个编码蛋白质的基因，其中包括867个功能未知的蛋白质以及70个编码RNA的基因（10个rRNA、59个tRNA和1个tmRNA）。鉴定出了4种负责抗菌肽生物合成的推定基因。NCBI生物项目已存入NCBI，登录号为PRJNA615901（https://www.ncbi.nlm.nih.gov/bioproject/PRJNA615901/），包含完整注释的基因组和原始序列数据。
