• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

转录组技术的进展让我们对人类白质病理学有了哪些认识?

What Have Advances in Transcriptomic Technologies Taught us About Human White Matter Pathologies?

作者信息

Jäkel Sarah, Williams Anna

机构信息

Centre for Regenerative Medicine, Institute for Regeneration and Repair, University of Edinburgh, Edinburgh, United Kingdom.

出版信息

Front Cell Neurosci. 2020 Aug 4;14:238. doi: 10.3389/fncel.2020.00238. eCollection 2020.

DOI:10.3389/fncel.2020.00238
PMID:32848627
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7418269/
Abstract

For a long time, post-mortem analysis of human brain pathologies has been purely descriptive, limiting insight into the pathological mechanisms. However, starting in the early 2000s, next-generation sequencing (NGS) and the routine application of bulk RNA-sequencing and microarray technologies have revolutionized the usefulness of post-mortem human brain tissue. This has allowed many studies to provide novel mechanistic insights into certain brain pathologies, albeit at a still unsatisfying resolution, with masking of lowly expressed genes and regulatory elements in different cell types. The recent rapid evolution of single-cell technologies has now allowed researchers to shed light on human pathologies at a previously unreached resolution revealing further insights into pathological mechanisms that will open the way for the development of new strategies for therapies. In this review article, we will give an overview of the incremental information that single-cell technologies have given us for human white matter (WM) pathologies, summarize which single-cell technologies are available, and speculate where these novel approaches may lead us for pathological assessment in the future.

摘要

长期以来,对人类脑部病理学的尸检分析一直纯粹是描述性的,限制了对病理机制的深入了解。然而,从21世纪初开始,新一代测序(NGS)以及批量RNA测序和微阵列技术的常规应用彻底改变了尸检人类脑组织的用途。这使得许多研究能够对某些脑部病理学提供新的机制性见解,尽管分辨率仍不尽人意,不同细胞类型中低表达基因和调控元件存在掩盖现象。单细胞技术最近的快速发展现在使研究人员能够以前所未有的分辨率揭示人类病理学,从而进一步深入了解病理机制,这将为新治疗策略的开发开辟道路。在这篇综述文章中,我们将概述单细胞技术为人类白质(WM)病理学提供的增量信息,总结可用的单细胞技术,并推测这些新方法未来可能在病理评估方面引领我们走向何方。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c69a/7418269/8f157e675996/fncel-14-00238-g0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c69a/7418269/e20bd9b88b26/fncel-14-00238-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c69a/7418269/1ae19f9e0dd1/fncel-14-00238-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c69a/7418269/6925219bf451/fncel-14-00238-g0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c69a/7418269/8f157e675996/fncel-14-00238-g0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c69a/7418269/e20bd9b88b26/fncel-14-00238-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c69a/7418269/1ae19f9e0dd1/fncel-14-00238-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c69a/7418269/6925219bf451/fncel-14-00238-g0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c69a/7418269/8f157e675996/fncel-14-00238-g0004.jpg

相似文献

1
What Have Advances in Transcriptomic Technologies Taught us About Human White Matter Pathologies?转录组技术的进展让我们对人类白质病理学有了哪些认识?
Front Cell Neurosci. 2020 Aug 4;14:238. doi: 10.3389/fncel.2020.00238. eCollection 2020.
2
Dissecting mammalian reproduction with spatial transcriptomics.利用空间转录组学解析哺乳动物生殖。
Hum Reprod Update. 2023 Nov 2;29(6):794-810. doi: 10.1093/humupd/dmad017.
3
Perspectives on Bulk-Tissue RNA Sequencing and Single-Cell RNA Sequencing for Cardiac Transcriptomics.心脏转录组学中批量组织RNA测序和单细胞RNA测序的前景
Front Mol Med. 2022 Feb 22;2:839338. doi: 10.3389/fmmed.2022.839338. eCollection 2022.
4
Macromolecular crowding: chemistry and physics meet biology (Ascona, Switzerland, 10-14 June 2012).大分子拥挤现象:化学与物理邂逅生物学(瑞士阿斯科纳,2012年6月10日至14日)
Phys Biol. 2013 Aug;10(4):040301. doi: 10.1088/1478-3975/10/4/040301. Epub 2013 Aug 2.
5
Transcriptomics of Human Brain Tissue in Parkinson's Disease: a Comparison of Bulk and Single-cell RNA Sequencing.帕金森病患者脑组织的转录组学研究:批量和单细胞 RNA 测序的比较。
Mol Neurobiol. 2024 Nov;61(11):8996-9015. doi: 10.1007/s12035-024-04124-5. Epub 2024 Apr 5.
6
Enhancement of Plant Productivity in the Post-Genomics Era.后基因组时代植物生产力的提高
Curr Genomics. 2016 Aug;17(4):295-6. doi: 10.2174/138920291704160607182507.
7
RNA-Seq technology and its application in fish transcriptomics.RNA测序技术及其在鱼类转录组学中的应用。
OMICS. 2014 Feb;18(2):98-110. doi: 10.1089/omi.2013.0110. Epub 2013 Dec 31.
8
Next-Generation Sequencing Approaches in Cancer: Where Have They Brought Us and Where Will They Take Us?癌症中的新一代测序方法:它们将我们带到了何处,又将把我们带向何方?
Cancers (Basel). 2015 Sep 23;7(3):1925-58. doi: 10.3390/cancers7030869.
9
The future of Cochrane Neonatal.考克兰新生儿协作网的未来。
Early Hum Dev. 2020 Nov;150:105191. doi: 10.1016/j.earlhumdev.2020.105191. Epub 2020 Sep 12.
10
How single-cell transcriptomics provides insight on hepatic responses to TCDD.单细胞转录组学如何深入了解肝脏对2,3,7,8-四氯二苯并对二恶英的反应。
Curr Opin Toxicol. 2023 Dec;36. doi: 10.1016/j.cotox.2023.100441. Epub 2023 Sep 28.

引用本文的文献

1
Identification and validation of hub genes associated with biotic and abiotic stresses by modular gene co-expression analysis in Oryza sativa L.通过水稻模块化基因共表达分析鉴定和验证与生物和非生物胁迫相关的枢纽基因
Sci Rep. 2025 Mar 12;15(1):8465. doi: 10.1038/s41598-025-92942-5.
2
Impact of fixation duration on messenger RNA detectability in human formalin-fixed paraffin-embedded brain tissue.固定时间对人福尔马林固定石蜡包埋脑组织中信使核糖核酸可检测性的影响。
Brain Commun. 2024 Nov 28;6(6):fcae430. doi: 10.1093/braincomms/fcae430. eCollection 2024.
3
Transcriptomic Approaches to Cardiomyocyte-Biomaterial Interactions: A Review.

本文引用的文献

1
Quantification of extracellular proteins, protein complexes and mRNAs in single cells by proximity sequencing.通过邻近测序技术定量单个细胞内的细胞外蛋白、蛋白复合物和 mRNAs。
Nat Methods. 2022 Dec;19(12):1578-1589. doi: 10.1038/s41592-022-01684-z. Epub 2022 Dec 1.
2
Transcriptome-scale spatial gene expression in the human dorsolateral prefrontal cortex.人类背外侧前额叶皮层转录组规模的空间基因表达。
Nat Neurosci. 2021 Mar;24(3):425-436. doi: 10.1038/s41593-020-00787-0. Epub 2021 Feb 8.
3
Single-cell epigenomic analyses implicate candidate causal variants at inherited risk loci for Alzheimer's and Parkinson's diseases.
转录组学方法在心肌细胞-生物材料相互作用中的研究进展:综述
ACS Biomater Sci Eng. 2024 Jul 8;10(7):4175-4194. doi: 10.1021/acsbiomaterials.4c00303. Epub 2024 Jun 27.
4
Distinct gene expression in demyelinated white and grey matter areas of patients with multiple sclerosis.多发性硬化症患者脱髓鞘白质和灰质区域的不同基因表达。
Brain Commun. 2022 Jan 17;4(2):fcac005. doi: 10.1093/braincomms/fcac005. eCollection 2022.
5
Oligodendroglia heterogeneity in the human central nervous system.人类中枢神经系统中的少突胶质细胞异质性。
Acta Neuropathol. 2022 Feb;143(2):143-157. doi: 10.1007/s00401-021-02390-4. Epub 2021 Dec 3.
6
Biomedical Relevance of Novel Anticancer Peptides in the Sensitive Treatment of Cancer.新型抗癌肽在癌症敏感治疗中的生物医学相关性。
Biomolecules. 2021 Jul 29;11(8):1120. doi: 10.3390/biom11081120.
7
Diversity of Reactive Astrogliosis in CNS Pathology: Heterogeneity or Plasticity?中枢神经系统病理学中反应性星形胶质细胞增生的多样性:异质性还是可塑性?
Front Cell Neurosci. 2021 Jul 26;15:703810. doi: 10.3389/fncel.2021.703810. eCollection 2021.
8
Altered Expression of Ion Channels in White Matter Lesions of Progressive Multiple Sclerosis: What Do We Know About Their Function?进展性多发性硬化症白质病变中离子通道的表达改变:我们对其功能了解多少?
Front Cell Neurosci. 2021 Jun 25;15:685703. doi: 10.3389/fncel.2021.685703. eCollection 2021.
9
Identification of the Potential Gene Regulatory Networks and Therapeutics in Aged Mice With Postoperative Neurocognitive Disorder.老年小鼠术后神经认知障碍潜在基因调控网络及治疗方法的鉴定
Front Neurosci. 2021 Jun 24;15:689188. doi: 10.3389/fnins.2021.689188. eCollection 2021.
10
Multiple Sclerosis Biomarker Discoveries by Proteomics and Metabolomics Approaches.通过蛋白质组学和代谢组学方法发现多发性硬化症生物标志物
Biomark Insights. 2021 May 6;16:11772719211013352. doi: 10.1177/11772719211013352. eCollection 2021.
单细胞表观基因组学分析提示阿尔茨海默病和帕金森病遗传风险位点的候选因果变异。
Nat Genet. 2020 Nov;52(11):1158-1168. doi: 10.1038/s41588-020-00721-x. Epub 2020 Oct 26.
4
Chromatin Potential Identified by Shared Single-Cell Profiling of RNA and Chromatin.基于 RNA 和染色质的共享单细胞分析鉴定染色质潜能
Cell. 2020 Nov 12;183(4):1103-1116.e20. doi: 10.1016/j.cell.2020.09.056. Epub 2020 Oct 23.
5
Single-cell RNA counting at allele and isoform resolution using Smart-seq3.基于 Smart-seq3 技术进行等位基因和异构体分辨率的单细胞 RNA 计数
Nat Biotechnol. 2020 Jun;38(6):708-714. doi: 10.1038/s41587-020-0497-0. Epub 2020 May 4.
6
Mature oligodendrocytes bordering lesions limit demyelination and favor myelin repair via heparan sulfate production.成熟少突胶质细胞在病变边缘限制脱髓鞘,并通过产生硫酸乙酰肝素促进髓鞘修复。
Elife. 2020 Jun 9;9:e51735. doi: 10.7554/eLife.51735.
7
Systematic comparison of single-cell and single-nucleus RNA-sequencing methods.单细胞和单细胞核 RNA 测序方法的系统比较。
Nat Biotechnol. 2020 Jun;38(6):737-746. doi: 10.1038/s41587-020-0465-8. Epub 2020 Apr 6.
8
Single-nucleus transcriptomics of the prefrontal cortex in major depressive disorder implicates oligodendrocyte precursor cells and excitatory neurons.重度抑郁症前额叶皮质的单核转录组学研究表明少突胶质前体细胞和兴奋性神经元与之有关。
Nat Neurosci. 2020 Jun;23(6):771-781. doi: 10.1038/s41593-020-0621-y. Epub 2020 Apr 27.
9
Single-nucleus RNA-seq identifies Huntington disease astrocyte states.单细胞 RNA-seq 鉴定亨廷顿病星形胶质细胞状态。
Acta Neuropathol Commun. 2020 Feb 18;8(1):19. doi: 10.1186/s40478-020-0880-6.
10
Functionally distinct subgroups of oligodendrocyte precursor cells integrate neural activity and execute myelin formation.功能不同的少突胶质前体细胞亚群整合神经活动并执行髓鞘形成。
Nat Neurosci. 2020 Mar;23(3):363-374. doi: 10.1038/s41593-019-0581-2. Epub 2020 Feb 17.