Agronomy Department, Fort Lauderdale Research and Education Center, University of Florida / IFAS, Davie, Florida, 33314, USA.
J Phycol. 2021 Feb;57(1):92-110. doi: 10.1111/jpy.13065. Epub 2020 Nov 25.
South Florida (USA) has a subtropical to tropical climate with an extensive and diverse coastline that supports the growth of benthic cyanobacterial mats (BCMs). These BCMs are widespread and potentially house numerous bioactive compounds; however, the extent of the cyanobacterial diversity within these mats remains largely unknown. To elucidate this diversity, BCMs from select locations in South Florida were sampled and isolated into unicyanobacterial cultures for morphological and molecular studies. Phylogenetic relationships of isolated taxa were assessed using the markers 16S rRNA and 16S-23S rRNA ITS by both maximum likelihood and Bayesian inference. We propose Affixifilum gen. nov. based on morphological characteristics and the 16S rRNA phylogeny. Two species are included: Affixifilum granulosum comb nov. (=Neolyngbya granulosa) found in Brazil and Florida (USA) and A. floridanum sp. nov. Several other features, including pair-wise distance of 16S rRNA and 16S-23S rRNA ITS, 16S-23S rRNA ITS secondary structure, morphology, and ecology, provide support for Affixifilum. We also propose the transfer of Lyngbya regalis to Neolyngbya as N. regalis comb. nov. and include the description of one novel species, N. biscaynensis sp. nov.
美国南佛罗里达州拥有亚热带到热带气候,拥有广阔多样的海岸线,支持着底栖蓝细菌席(BCMs)的生长。这些 BCMs 分布广泛,可能蕴藏着许多生物活性化合物;然而,这些席中蓝细菌的多样性程度在很大程度上仍不清楚。为了阐明这种多样性,从南佛罗里达州的选定地点采集了 BCMs 并分离成单种蓝细菌培养物,用于形态学和分子研究。使用最大似然法和贝叶斯推断法,通过 16S rRNA 和 16S-23S rRNA ITS 标记评估分离类群的系统发育关系。我们根据形态特征和 16S rRNA 系统发育提出了 Affixifilum 属。包含两个种:Affixifilum granulosum comb nov.(=Neolyngbya granulosa),分布于巴西和佛罗里达州(美国),以及 A. floridanum sp. nov. 其他一些特征,包括 16S rRNA 和 16S-23S rRNA ITS 的成对距离、16S-23S rRNA ITS 二级结构、形态和生态,都支持 Affixifilum 属的存在。我们还提议将 Lyngbya regalis 转移到 Neolyngbya 中,作为 N. regalis comb. nov. 并包括一个新种的描述,N. biscaynensis sp. nov.