Department of Biology and Biochemistry, University of Houston, Houston, TX, USA.
Department of Chemical and Biomolecular Engineering, University of Houston, Houston, TX, USA.
Crit Rev Biotechnol. 2020 Dec;40(8):1131-1150. doi: 10.1080/07388551.2020.1808583. Epub 2020 Aug 30.
Tools for tuning transcription in mammalian cells have broad applications, from basic biological discovery to human gene therapy. While precise control over target gene transcription dosing with small molecules (drugs) is highly sought, the design of such inducible systems that meets required performance metrics poses a great challenge in mammalian cell synthetic biology. Important characteristics include tight and tunable gene expression with a low background, minimal drug toxicity, and orthogonality. Here, we review small-molecule-inducible transcriptional control devices that have demonstrated success in mammalian cells and mouse models. Most of these systems employ natural or designed ligand-binding protein domains to directly or indirectly communicate with transcription machinery at a target sequence, carefully constructed fusions. Example fusions include those to transcription activator-like effectors (TALEs), DNA-targeting proteins (e.g. dCas systems) fused to transactivating domains, and recombinases. Similar to the architecture of Type I nuclear receptors, many of the systems are designed such that the transcriptional controller is excluded from the nucleus in the absence of an inducer. Techniques that use ligand-induced proteolysis and antibody-based chemically induced dimerizers are also described. Collectively, these transcriptional control devices take advantage of a variety of recently developed molecular biology tools and cell biology insights and represent both proof of concept (e.g. targeting reporter gene expression) and disease-targeting studies.
在哺乳动物细胞中,用于调节转录的工具具有广泛的应用,从基础生物学发现到人类基因治疗。虽然人们高度追求通过小分子(药物)对靶基因转录进行精确控制,但设计满足所需性能指标的这种诱导系统在哺乳动物细胞合成生物学中是一个巨大的挑战。重要的特征包括具有低背景的紧密和可调的基因表达、最小的药物毒性和正交性。在这里,我们回顾了在哺乳动物细胞和小鼠模型中已经证明成功的小分子诱导转录控制装置。这些系统中的大多数都使用天然或设计的配体结合蛋白结构域,通过精心构建的融合,直接或间接地与转录机器在靶序列上进行通讯。例如融合包括转录激活因子样效应物(TALEs)、与转录激活结构域融合的 DNA 靶向蛋白(如 dCas 系统)以及重组酶。与 I 型核受体的结构类似,许多系统的设计使得转录控制器在没有诱导剂的情况下被排除在核外。还描述了使用配体诱导蛋白水解和基于抗体的化学诱导二聚体的技术。这些转录控制装置共同利用了各种最近开发的分子生物学工具和细胞生物学见解,代表了概念验证(例如靶向报告基因表达)和疾病靶向研究。