She Qianxuan, Hunter Evan, Qin Yuxuan, Nicolau Samantha, Zalis Eliza A, Wang Hongkai, Chen Yun, Chai Yunrong
Department of Biology, Northeastern University, Boston, Massachusetts, USA.
Institute of Biotechnology, Zhejiang University, Hangzhou, China.
mSystems. 2020 Sep 1;5(5):e00539-20. doi: 10.1128/mSystems.00539-20.
Environmental strains of the soil bacterium have valuable applications in agriculture, industry, and biotechnology; however, environmental strains are genetically less accessible. This reduced accessibility is in sharp contrast to laboratory strains, which are well known for their natural competence, and a limitation in their applications. In this study, we observed that robust biofilm formation by environmental strains of greatly reduced the frequency of competent cells in the biofilm. By using model strain 3610, we revealed a cross-pathway regulation that allows biofilm matrix producers and competence-developing cells to undergo mutually exclusive cell differentiation. We further demonstrated that the competence activator ComK represses the key biofilm regulatory gene by directly binding to the promoter, thus blocking competent cells from simultaneously becoming matrix producers. In parallel, the biofilm activator SlrR represses competence through three distinct mechanisms involving both genetic regulation and cell morphological changes. Finally, we discuss the potential implications of limiting competence in a bacterial biofilm. The soil bacterium can form robust biofilms, which are important for its survival in the environment. also exhibits natural competence. By investigating competence development in during biofilm formation, we reveal that robust biofilm formation often greatly reduces the frequency of competent cells within the biofilm. We then characterize a cross-pathway regulation that allows cells in these two developmental events to undergo mutually exclusive cell differentiation during biofilm formation. Finally, we discuss potential biological implications of limiting competence in a bacterial biofilm.
土壤细菌的环境菌株在农业、工业和生物技术领域具有重要应用;然而,环境菌株在基因层面上较难进行研究。这种降低的可及性与实验室菌株形成鲜明对比,实验室菌株以其天然感受态而闻名,但这也限制了它们的应用。在本研究中,我们观察到土壤细菌的环境菌株形成的强大生物膜显著降低了生物膜中感受态细胞的频率。通过使用模式菌株3610,我们揭示了一种交叉途径调控机制,该机制使得生物膜基质产生细胞和感受态发育细胞进行互斥的细胞分化。我们进一步证明,感受态激活因子ComK通过直接结合启动子来抑制关键的生物膜调控基因,从而阻止感受态细胞同时成为基质产生细胞。同时,生物膜激活因子SlrR通过涉及基因调控和细胞形态变化的三种不同机制来抑制感受态。最后,我们讨论了在细菌生物膜中限制感受态的潜在意义。土壤细菌能够形成强大的生物膜,这对其在环境中的生存至关重要。该细菌还表现出天然感受态。通过研究生物膜形成过程中的感受态发育,我们发现强大的生物膜形成通常会大大降低生物膜内感受态细胞的频率。然后,我们描述了一种交叉途径调控,该调控使得这两个发育过程中的细胞在生物膜形成过程中进行互斥的细胞分化。最后,我们讨论了在细菌生物膜中限制感受态的潜在生物学意义。