Courtier-Orgogozo Virginie, Danchin Antoine, Gouyon Pierre-Henri, Boëte Christophe
Institut Jacques Monod CNRS UMR 7592 Université de Paris Paris France.
Institut Cochin INSERM U1016 - CNRS UMR8104 - Université Paris Descartes Paris France.
Evol Appl. 2020 Apr 17;13(8):1888-1905. doi: 10.1111/eva.12939. eCollection 2020 Sep.
The probability D that a given clustered regularly interspaced short palindromic repeats (CRISPR)-based gene drive element contaminates another, nontarget species can be estimated by the following Drive Risk Assessment Quantitative Estimate (DRAQUE) Equation: with = probability of hybridization between the target species and a nontarget species; = probability of horizontal transfer of a piece of DNA containing the gene drive cassette from the target species to a nontarget species (with no hybridization); = probability that the and guide RNA genes are expressed; = probability that the CRISPR-guide RNA recognizes and cuts at a DNA site in the new host; = probability that the gene drive cassette inserts at the cut site; = probability that the immune system does not reject -expressing cells; = probability of invasion of the drive within the population. We discuss and estimate each of the seven parameters of the equation, with particular emphasis on possible transfers within insects, and between rodents and humans. We conclude from current data that the probability of a gene drive cassette to contaminate another species is not insignificant. We propose strategies to reduce this risk and call for more work on estimating all the parameters of the formula.
给定的基于成簇规律间隔短回文重复序列(CRISPR)的基因驱动元件污染另一个非目标物种的概率D,可通过以下基因驱动风险评估定量估计(DRAQUE)方程来估算:其中,=目标物种与非目标物种之间杂交的概率;=一段包含基因驱动盒的DNA从目标物种水平转移至非目标物种(无杂交)的概率;=和引导RNA基因表达的概率;=CRISPR引导RNA识别并切割新宿主中DNA位点的概率;=基因驱动盒插入切割位点的概率;=免疫系统不排斥表达细胞的概率;=驱动在种群内扩散的概率。我们讨论并估算了该方程的七个参数,特别强调了昆虫内部以及啮齿动物与人类之间可能的转移情况。我们从当前数据得出结论,基因驱动盒污染另一个物种的概率并非微不足道。我们提出了降低这种风险的策略,并呼吁开展更多工作来估算该公式的所有参数。