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草地集栖菌菌株PMB3(1)的基因组序列草图，该菌株是一种有效的矿物风化和几丁质水解细菌菌株。

Draft Genome Sequence of Collimonas pratensis Strain PMB3(1), an Effective Mineral-Weathering and Chitin-Hydrolyzing Bacterial Strain.

作者信息

Picard Laura, Oger Philippe, Turpault Marie-Pierre, Uroz Stéphane

机构信息

Université de Lorraine, INRAe, UMR 1136 Interactions Arbres-Microorganismes, Champenoux, France.

INRAe, UR 1138 Biogéochimie des Écosystèmes Forestiers, Champenoux, France.

出版信息

Microbiol Resour Announc. 2020 Sep 10;9(37):e00601-20. doi: 10.1128/MRA.00601-20.

DOI:10.1128/MRA.00601-20
PMID:32912907
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7484066/
Abstract

We announce the draft genome sequence of PMB3(1), isolated from the mycorrhizosphere. In addition to its mineral-weathering effectiveness and antifungal activity, this strain is characterized by genomic features that give it great potential as a biocontrol and plant growth-promoting agent in nutrient-poor soils.

摘要

我们公布了从菌根际分离出的PMB3(1)的基因组序列草图。除了其矿物风化效能和抗真菌活性外，该菌株还具有基因组特征，使其在养分贫瘠的土壤中作为生物防治和促进植物生长的试剂具有巨大潜力。

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本文引用的文献

1
Collimonas antrihumi sp. nov., isolated from a natural cave and emended description of the genus Collimonas.洞穴栖生食源菌新种，从天然洞穴中分离得到，并对栖生食源菌属进行修订描述。
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The bacterial genus Collimonas: mycophagy, weathering and other adaptive solutions to life in oligotrophic soil environments.胶冻样芽孢杆菌属：食真菌性、风化作用和在贫营养土壤环境中生存的其他适应性解决方案。
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Collimonas arenae sp. nov. and Collimonas pratensis sp. nov., isolated from (semi-)natural grassland soils.沙栖食菌蛭弧菌新种和草地食菌蛭弧菌新种，从（半）天然草地土壤中分离得到。
Int J Syst Evol Microbiol. 2008 Feb;58(Pt 2):414-9. doi: 10.1099/ijs.0.65375-0.
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Impact of ectomycorrhizosphere on the functional diversity of soil bacterial and fungal communities from a forest stand in relation to nutrient mobilization processes.外生菌根际对森林林分土壤细菌和真菌群落功能多样性的影响及其与养分活化过程的关系。
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Effect of the mycorrhizosphere on the genotypic and metabolic diversity of the bacterial communities involved in mineral weathering in a forest soil.菌根际对森林土壤中参与矿物风化的细菌群落的基因型和代谢多样性的影响。
Appl Environ Microbiol. 2007 May;73(9):3019-27. doi: 10.1128/AEM.00121-07. Epub 2007 Mar 9.
7
Collimonas fungivorans gen. nov., sp. nov., a chitinolytic soil bacterium with the ability to grow on living fungal hyphae.食真菌鞘氨醇单胞菌属，新属，新种，一种具有在活真菌菌丝上生长能力的几丁质分解土壤细菌。
Int J Syst Evol Microbiol. 2004 May;54(Pt 3):857-864. doi: 10.1099/ijs.0.02920-0.
8
A versatile quick-prep of genomic DNA from gram-positive bacteria.一种从革兰氏阳性细菌中快速制备基因组DNA的通用方法。
Trends Genet. 1995 Jun;11(6):217-8. doi: 10.1016/s0168-9525(00)89052-6.
9
Cloning of a mineral phosphate-solubilizing gene from Pseudomonas cepacia.从洋葱伯克霍尔德菌中克隆一种矿物磷酸盐溶解基因。
Appl Environ Microbiol. 1995 Mar;61(3):972-8. doi: 10.1128/aem.61.3.972-978.1995.