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在高温胁迫下,拟南芥对青枯菌定量疾病抗性的自然变异是由加性和上位性数量性状位点的复杂网络所决定的。

A complex network of additive and epistatic quantitative trait loci underlies natural variation of Arabidopsis thaliana quantitative disease resistance to Ralstonia solanacearum under heat stress.

机构信息

LIPM, Université de Toulouse, INRAE, CNRS, Castanet-Tolosan, France.

SYNGENTA seeds, Sarrians, France.

出版信息

Mol Plant Pathol. 2020 Nov;21(11):1405-1420. doi: 10.1111/mpp.12964. Epub 2020 Sep 11.

Abstract

Plant immunity is often negatively impacted by heat stress. However, the underlying molecular mechanisms remain poorly characterized. Based on a genome-wide association mapping approach, this study aims to identify in Arabidopsis thaliana the genetic bases of robust resistance mechanisms to the devastating pathogen Ralstonia solanacearum under heat stress. A local mapping population was phenotyped against the R. solanacearum GMI1000 strain at 27 and 30 °C. To obtain a precise description of the genetic architecture underlying natural variation of quantitative disease resistance (QDR), we applied a genome-wide local score analysis. Alongside an extensive genetic variation found in this local population at both temperatures, we observed a playful dynamics of quantitative trait loci along the infection stages. In addition, a complex genetic network of interacting loci could be detected at 30 °C. As a first step to investigate the underlying molecular mechanisms, the atypical meiotic cyclin SOLO DANCERS gene was validated by a reverse genetic approach as involved in QDR to R. solanacearum at 30 °C. In the context of climate change, the complex genetic architecture underlying QDR under heat stress in a local mapping population revealed candidate genes with diverse molecular functions.

摘要

植物的免疫功能常常受到热应激的负面影响。然而,其潜在的分子机制仍未得到很好的描述。本研究基于全基因组关联图谱绘制方法,旨在鉴定拟南芥中对热应激条件下具有破坏性的病原体丁香假单胞菌具有稳健抗性机制的遗传基础。在 27 和 30°C 下,对局部图谱群体针对丁香假单胞菌 GMI1000 菌株进行了表型分析。为了精确描述定量疾病抗性(QDR)自然变异的遗传结构,我们应用了全基因组局部评分分析。除了在这两个温度下局部群体中发现的广泛遗传变异外,我们还观察到数量性状位点在感染阶段的动态变化。此外,在 30°C 时还可以检测到复杂的相互作用基因网络。作为研究潜在分子机制的第一步,通过反向遗传学方法验证了非典型减数分裂细胞周期蛋白 SOLO DANCERS 基因参与了拟南芥对丁香假单胞菌的 QDR。在气候变化的背景下,局部图谱群体中热应激下 QDR 的复杂遗传结构揭示了具有不同分子功能的候选基因。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/714d/7548995/dfd8e95aa7e9/MPP-21-1405-g001.jpg

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