Dan L Duncan Comprehensive Cancer Center, Baylor College of Medicine, Houston, Texas; Division of Hematology and Oncology, Department of Medicine, Cancer Center, and Genomic Sciences & Precision Medicine Center, Medical College of Wisconsin, Milwaukee, Wisconsin.
Institute for Genomic Statistics and Bioinformatics, Medical Faculty, University of Bonn, Germany.
Gastroenterology. 2020 Dec;159(6):2065-2076.e1. doi: 10.1053/j.gastro.2020.08.052. Epub 2020 Sep 9.
BACKGROUND & AIMS: Esophageal adenocarcinoma (EA) and its premalignant lesion, Barrett's esophagus (BE), are characterized by a strong and yet unexplained male predominance (with a male-to-female ratio in EA incidence of up to 6:1). Genome-wide association studies (GWAS) have identified more than 20 susceptibility loci for these conditions. However, potential sex differences in genetic associations with BE/EA remain largely unexplored.
Given strong genetic overlap, BE and EA cases were combined into a single case group for analysis. These were compared with population-based controls. We performed sex-specific GWAS of BE/EA in 3 separate studies and then used fixed-effects meta-analysis to provide summary estimates for >9 million variants for male and female individuals. A series of downstream analyses were conducted separately in male and female individuals to identify genes associated with BE/EA and the genetic correlations between BE/EA and other traits.
We included 6758 male BE/EA cases, 7489 male controls, 1670 female BE/EA cases, and 6174 female controls. After Bonferroni correction, our meta-analysis of sex-specific GWAS identified 1 variant at chromosome 6q11.1 (rs112894788, KHDRBS2-MTRNR2L9, P = .039) that was statistically significantly associated with BE/EA risk in male individuals only, and 1 variant at chromosome 8p23.1 (rs13259457, PRSS55-RP1L1, P = 0.057) associated, at borderline significance, with BE/EA risk in female individuals only. We also observed strong genetic correlations of BE/EA with gastroesophageal reflux disease in male individuals and obesity in female individuals.
The identified novel sex-specific variants associated with BE/EA could improve the understanding of the genetic architecture of the disease and the reasons for the male predominance.
食管腺癌(EA)及其癌前病变 Barrett 食管(BE)的特征是男性明显高发(EA 发病率的男女比例高达 6:1),但原因尚不清楚。全基因组关联研究(GWAS)已经确定了 20 多个与这些疾病相关的易感基因位点。然而,BE/EA 与遗传相关的潜在性别差异在很大程度上仍未得到探索。
由于遗传重叠较强,将 BE 和 EA 病例合并为一个病例组进行分析。将这些病例与基于人群的对照进行比较。我们在 3 项独立研究中对 BE/EA 进行了性别特异性 GWAS,然后使用固定效应荟萃分析为男性和女性个体的超过 900 万个变异体提供了汇总估计值。在男性和女性个体中分别进行了一系列下游分析,以确定与 BE/EA 相关的基因,以及 BE/EA 与其他特征之间的遗传相关性。
我们纳入了 6758 名男性 BE/EA 病例、7489 名男性对照、1670 名女性 BE/EA 病例和 6174 名女性对照。经过 Bonferroni 校正,我们对性别特异性 GWAS 的荟萃分析确定了 1 个位于染色体 6q11.1 上的变异体(rs112894788,KHDRBS2-MTRNR2L9,P =.039),该变异体仅与男性个体的 BE/EA 风险相关;1 个位于染色体 8p23.1 上的变异体(rs13259457,PRSS55-RP1L1,P = 0.057)与女性个体的 BE/EA 风险呈边缘显著相关。我们还观察到 BE/EA 与男性个体的胃食管反流病和女性个体的肥胖之间存在很强的遗传相关性。
鉴定出的与 BE/EA 相关的新型性别特异性变异体可提高对该疾病遗传结构及其男性高发原因的认识。