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基于共聚焦显微镜成像构建微管丝网状结构模型

Modeling a Microtubule Filaments Mesh Structure from Confocal Microscopy Imaging.

作者信息

Ueno Yutaka, Matsuda Kento, Katoh Kaoru, Kuzuya Akinori, Kakugo Akira, Konagaya Akihiko

机构信息

National Institute of Advanced Industrial Science and Technology, 2-4-7 Aomi, Koto-ku, Tokyo 135-0064, Japan.

Graduate School of Chemical Sciences and Engineering, Hokkaido University, North 10 West 8, Kita-ku, Sapporo 060-0810, Japan.

出版信息

Micromachines (Basel). 2020 Sep 10;11(9):844. doi: 10.3390/mi11090844.

Abstract

This study introduces a modeling method for a supermolecular structure of microtubules for the development of a force generation material using motor proteins. 3D imaging by confocal laser scanning microscopy (CLSM) was used to obtain 3D volume density data. The density data were then interpreted by a set of cylinders with the general-purpose 3D modeling software Blender, and a 3D network structure of microtubules was constructed. Although motor proteins were not visualized experimentally, they were introduced into the model to simulate pulling of the microtubules toward each other to yield shrinking of the network, resulting in contraction of the artificial muscle. From the successful force generation simulation of the obtained model structure of artificial muscle, the modeling method introduced here could be useful in various studies for potential improvements of this contractile molecular system.

摘要

本研究介绍了一种用于微管超分子结构的建模方法,以开发使用马达蛋白的力产生材料。利用共聚焦激光扫描显微镜(CLSM)进行三维成像以获得三维体积密度数据。然后使用通用三维建模软件Blender通过一组圆柱体对密度数据进行解释,并构建微管的三维网络结构。尽管实验中未观察到马达蛋白,但将其引入模型以模拟微管相互牵拉,从而使网络收缩,导致人工肌肉收缩。从所获得的人工肌肉模型结构的成功力产生模拟来看,这里介绍的建模方法可能在各种研究中有助于对这种收缩分子系统进行潜在改进。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f8e5/7570018/466435426070/micromachines-11-00844-g001.jpg

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