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多形性胶质母细胞瘤中cullin5-RING E3连接酶转录组特征的鉴定

Identification of a cullin5-RING E3 ligase transcriptome signature in glioblastoma multiforme.

作者信息

Zheng Shuhua, Li Zhenhao

机构信息

Nova Southeastern University, College of Osteopathic Medicine, Fort Lauderdale, FL 33134, USA.

Zhejiang University, College of Pharmaceutical Science, Zhejiang Province 310027, PR China.

出版信息

Aging (Albany NY). 2020 Sep 14;12(17):17380-17392. doi: 10.18632/aging.103737.

Abstract

Glioblastoma multiforme (GBM) is the deadliest type of brain tumor. The median survival time for patients with GBM is only 15 months, even following maximal surgical resection and chemotherapy and radiation therapy. A genetic biomarker could enable a paradigm shift in precise diagnosis, personalized therapeutics and prognosis. In this study, we employed the Chinese Glioma Genome Atlas, The Cancer Genome Atlas, and the Ivy Glioblastoma Atlas Project databases for RNA sequencing (RNA-seq) analysis and clinicopathological studies. We demonstrated that elevated expression of the , and genes, which encode components of cullin5-RING E3 ligase (CRL5), predict unfavorable GBM prognoses. In GBM and glioma cases carrying mutations, and methylation was increased and their expression was downregulated. This study has thus identified a simple transcriptome signature for GBM prognosis.

摘要

多形性胶质母细胞瘤(GBM)是最致命的脑肿瘤类型。即使经过最大程度的手术切除、化疗和放疗,GBM患者的中位生存时间也仅为15个月。一种基因生物标志物能够在精确诊断、个性化治疗和预后方面引发范式转变。在本研究中,我们利用中国胶质瘤基因组图谱、癌症基因组图谱和常春藤胶质母细胞瘤图谱计划数据库进行RNA测序(RNA-seq)分析和临床病理研究。我们证明,编码cullin5-RING E3连接酶(CRL5)组分的 、 和 基因的表达升高预示GBM预后不良。在携带 突变的GBM和胶质瘤病例中, 和 甲基化增加且其表达下调。因此,本研究确定了一种用于GBM预后的简单转录组特征。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1fe/7521521/9bf828e87abc/aging-12-103737-g001.jpg

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