Budhadev Darshita, Poole Emma, Nehlmeier Inga, Liu Yuanyuan, Hooper James, Kalverda Elizabeth, Akshath Uchangi Satyaprasad, Hondow Nicole, Turnbull W Bruce, Pöhlmann Stefan, Guo Yuan, Zhou Dejian
School of Chemistry and Astbury Centre for Structural Molecular Biology, University of Leeds, Leeds LS2 9JT, United Kingdom.
Infection Biology Unit, German Primate Center-Leibniz Institute for Primate Research and Faculty of Biology and Psychology, University of Göttingen, Göttingen 37073, Germany.
J Am Chem Soc. 2020 Oct 21;142(42):18022-18034. doi: 10.1021/jacs.0c06793. Epub 2020 Sep 29.
Multivalent lectin-glycan interactions are widespread in biology and are often exploited by pathogens to bind and infect host cells. Glycoconjugates can block such interactions and thereby prevent infection. The inhibition potency strongly depends on matching the spatial arrangement between the multivalent binding partners. However, the structural details of some key lectins remain unknown and different lectins may exhibit overlapping glycan specificity. This makes it difficult to design a glycoconjugate that can potently and specifically target a particular multimeric lectin for therapeutic interventions, especially under the challenging in vivo conditions. Conventional techniques such as surface plasmon resonance (SPR) and isothermal titration calorimetry (ITC) can provide quantitative binding thermodynamics and kinetics. However, they cannot reveal key structural information, e.g., lectin's binding site orientation, binding mode, and interbinding site spacing, which are critical to design specific multivalent inhibitors. Herein we report that gold nanoparticles (GNPs) displaying a dense layer of simple glycans are powerful mechanistic probes for multivalent lectin-glycan interactions. They can not only quantify the GNP-glycan-lectin binding affinities via a new fluorescence quenching method, but also reveal drastically different affinity enhancing mechanisms between two closely related tetrameric lectins, DC-SIGN (simultaneous binding to one GNP) and DC-SIGNR (intercross-linking with multiple GNPs), via a combined hydrodynamic size and electron microscopy analysis. Moreover, a new term, potential of assembly formation (PAF), has been proposed to successfully predict the assembly outcomes based on the binding mode between GNP-glycans and lectins. Finally, the GNP-glycans can potently and completely inhibit DC-SIGN-mediated augmentation of Ebola virus glycoprotein-driven cell entry (with IC values down to 95 pM), but only partially block DC-SIGNR-mediated virus infection. Our results suggest that the ability of a glycoconjugate to simultaneously block all binding sites of a target lectin is key to robust inhibition of viral infection.
多价凝集素-聚糖相互作用在生物学中广泛存在,病原体常常利用这种相互作用来结合并感染宿主细胞。糖缀合物可以阻断此类相互作用,从而预防感染。抑制效力在很大程度上取决于多价结合伴侣之间空间排列的匹配情况。然而,一些关键凝集素的结构细节仍不清楚,而且不同的凝集素可能表现出重叠的聚糖特异性。这使得设计一种能够有效且特异性地靶向特定多聚体凝集素用于治疗干预的糖缀合物变得困难,尤其是在具有挑战性的体内条件下。诸如表面等离子体共振(SPR)和等温滴定量热法(ITC)等传统技术可以提供定量的结合热力学和动力学信息。然而,它们无法揭示关键的结构信息,例如凝集素的结合位点取向、结合模式以及结合位点之间的间距,而这些对于设计特异性多价抑制剂至关重要。在此我们报告,展示有一层致密简单聚糖的金纳米颗粒(GNP)是用于多价凝集素-聚糖相互作用的强大机制探针。它们不仅可以通过一种新的荧光猝灭方法来量化GNP-聚糖-凝集素的结合亲和力,还可以通过联合流体动力学尺寸和电子显微镜分析揭示两种密切相关的四聚体凝集素,即DC-SIGN(同时结合到一个GNP)和DC-SIGNR(与多个GNP相互交联)之间截然不同的亲和力增强机制。此外,还提出了一个新术语,即组装形成潜力(PAF),以基于GNP-聚糖与凝集素之间的结合模式成功预测组装结果。最后,GNP-聚糖可以有效且完全抑制DC-SIGN介导的埃博拉病毒糖蛋白驱动的细胞进入(IC值低至95 pM),但只能部分阻断DC-SIGNR介导的病毒感染。我们的结果表明,糖缀合物同时阻断靶凝集素所有结合位点的能力是强效抑制病毒感染的关键。