Tsai Ruei-Fong, Lin Nien-Chen, Kao Te-Yu, Kuo Yun-Hsuan, Lo Feng-Chun, Liaw Wen-Feng, Chiang Yun-Wei
Department of Chemistry, National Tsing Hua University, Hsinchu, Taiwan.
J Phys Chem Lett. 2020 Oct 15;11(20):8538-8542. doi: 10.1021/acs.jpclett.0c02200. Epub 2020 Sep 24.
The YtfE protein catalyzes the reduction of NO to NO, protecting iron-sulfur clusters from nitrosylation. The structure of YtfE has a two-domain architecture, with a diiron-containing C-terminal domain linked to an N-terminal domain, in which the function of the latter is enigmatic. Here, by using electron spin resonance (ESR) spectroscopy, we show that YtfE exists in two conformational states, one of which has not been reported. Under high osmotic stress, YtfE adopts a homogeneous conformation (C state) similar to the known crystal structure. In a regular buffer, the N-terminal domain switches between the C state and a previously unidentified conformation (C' state), the latter of which has more space at the domain interface to allow the trafficking of NO molecules and thus is proposed to be a functionally active state. The conformational switch between the C and C' states is pivotal for facilitating NO access to the diiron core.
YtfE蛋白催化一氧化氮(NO)还原为一氧化二氮(N₂O),保护铁硫簇免受亚硝基化作用。YtfE的结构具有双结构域架构,含双铁的C端结构域与N端结构域相连,而后者的功能尚不清楚。在此,我们通过电子自旋共振(ESR)光谱表明,YtfE存在两种构象状态,其中一种尚未见报道。在高渗透压胁迫下,YtfE呈现出与已知晶体结构相似的均匀构象(C态)。在常规缓冲液中,N端结构域在C态和一种先前未鉴定的构象(C'态)之间转换,后者在结构域界面处有更多空间以允许NO分子通过,因此被认为是功能活性状态。C态和C'态之间的构象转换对于促进NO进入双铁核心至关重要。