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一名儿童患指甲-髌骨综合征并伴有早期发作的终末期肾病,其LMX1B同源结构域存在新的杂合错义突变:病例报告

Nail-Patella syndrome with early onset end-stage renal disease in a child with a novel heterozygous missense mutation in the LMX1B homeodomain: A case report.

作者信息

Carinelli Soledad, Blanco Olalla Alvarez, Perdomo-Ramirez Ana, Claverie-Martin Felix

机构信息

Unidad de Investigación, Hospital Universitario Nuestra Señora de Candelaria, 38010 Santa Cruz de Tenerife, Spain.

Nefrologia Infantil, Hospital General Univesitario Gregorio Marañón, 28007 Madrid, Spain.

出版信息

Biomed Rep. 2020 Nov;13(5):49. doi: 10.3892/br.2020.1356. Epub 2020 Sep 4.

DOI:10.3892/br.2020.1356
PMID:32963778
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7490783/
Abstract

Nail-Patella syndrome (NPS) is an inherited disease characterized by nail and skeletal anomalies, nephropathy and glaucoma. The diagnosis of NPS is based on clinical findings, including hypoplastic or absent patella, dystrophic nails, dysplasia of the elbows and iliac horns. However, the main determinant of NPS prognosis is nephropathy, which may range from asymptomatic proteinuria to end-stage renal disease. NPS is caused by heterozygous loss-of-function mutations in the gene, which encodes the LIM homeodomain transcription factor LMX1B. LMX1B serves an essential role in the physiological development of dorsal-ventral limb structures, morphogenesis and function of podocytes, as well as in development of the anterior segments of the eyes, and in certain types of neurons. The present study aimed to identify the disease-causing mutation in a 2-year old girl with nephrotic syndrome that evolved rapidly to end-stage renal disease. The patient showed classical symptoms of NPS including dystrophic nails and an absence of the patellae. DNA sequence analysis identified a novel missense variant in exon 4 of (c.709T>C, p.S237P); this substitution affected a conserved serine residue in the homeodomain of LMX1B and was predicted to be pathogenic. modeling of the homeodomain revealed that the p.S237P mutation converted the A236-S237-F238 segment of α-helix 1 into a strand. It was hypothesized that this mutation affected binding of the transcription factor to its target DNA, thus abrogating transcription activation, which would explain the phenotype that manifested in the patient.

摘要

指甲-髌骨综合征(NPS)是一种遗传性疾病,其特征为指甲和骨骼异常、肾病和青光眼。NPS的诊断基于临床表现,包括髌骨发育不全或缺失、指甲营养不良、肘部发育异常和髂角。然而,NPS预后的主要决定因素是肾病,其范围可能从无症状蛋白尿到终末期肾病。NPS是由该基因的杂合功能丧失突变引起的,该基因编码LIM同源结构域转录因子LMX1B。LMX1B在背腹肢体结构的生理发育、足细胞的形态发生和功能以及眼睛前段的发育以及某些类型的神经元中发挥着重要作用。本研究旨在确定一名2岁肾病综合征女孩的致病突变,该女孩迅速发展为终末期肾病。患者表现出NPS的典型症状,包括指甲营养不良和髌骨缺失。DNA序列分析在该基因的外显子4中鉴定出一个新的错义变体(c.709T>C,p.S237P);这种替代影响了LMX1B同源结构域中一个保守的丝氨酸残基,预计具有致病性。同源结构域的建模显示,p.S237P突变将α螺旋1的A236-S237-F238片段转化为一条链。据推测,这种突变影响了转录因子与其靶DNA的结合,从而消除了转录激活,这可以解释患者表现出的表型。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a1c6/7490783/45fb13b2a351/br-13-05-01356-g01.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a1c6/7490783/5dc8172a4bdf/br-13-05-01356-g00.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a1c6/7490783/45fb13b2a351/br-13-05-01356-g01.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a1c6/7490783/5dc8172a4bdf/br-13-05-01356-g00.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a1c6/7490783/45fb13b2a351/br-13-05-01356-g01.jpg

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本文引用的文献

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Intractable Rare Dis Res. 2019 Feb;8(1):14-19. doi: 10.5582/irdr.2018.01131.
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VarSome: the human genomic variant search engine.VarSome:人类基因组变异搜索引擎。
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Nail-patella syndrome.指甲-髌骨综合征
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Nail-Patella Syndrome: clinical and molecular data in 55 families raising the hypothesis of a genetic heterogeneity.指甲-髌骨综合征:55个家族的临床和分子数据,提出遗传异质性假说。
Eur J Hum Genet. 2016 Jan;24(1):44-50. doi: 10.1038/ejhg.2015.77. Epub 2015 Apr 22.
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