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使用迈阿密耳基因panel 对近亲家族进行听力损失筛查。

Screening Consanguineous Families for Hearing Loss Using the MiamiOtoGenes Panel.

机构信息

Department of Otolaryngology, University of Miami Miller School of Medicine, Miami, Florida, USA.

Dr. John T. Macdonald Foundation, Department of Human Genetics, University of Miami Miller School of Medicine, Miami, Florida, USA.

出版信息

Genet Test Mol Biomarkers. 2020 Oct;24(10):674-680. doi: 10.1089/gtmb.2020.0153. Epub 2020 Sep 29.

DOI:10.1089/gtmb.2020.0153
PMID:32991204
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7585618/
Abstract

Hearing loss (HL) is one of the most common and genetically heterogeneous sensory disorders in humans. Genetic causes underlie 50-60% of all HL and the majority of these cases exhibit an autosomal recessive model of inheritance. In our study, we used our targeted custom MiamiOtoGenes panel of 180 HL-associated genes to screen 23 unrelated consanguineous Iranian families with at least two affected children to identify potential causal variants for HL. We identified pathogenic variants in seven genes (, and ) in nine unrelated families with varying HL profiles. These include five reported and four novel mutations. For small consanguineous families that were unsuitable for conventional linkage analysis the employment of the MiamiOtoGenes panel helped identify the genetic cause of HL in a cost-effective and timely manner. This rapid methodology provides for diagnoses of a significant fraction of HL patients, and identifies those who will need more extensive genetic analyses such as whole exome/genome sequencing.

摘要

听力损失(HL)是人类最常见且遗传异质性最强的感觉障碍之一。遗传因素导致了 50-60%的 HL,而这些病例中的大多数表现出常染色体隐性遗传模式。在我们的研究中,我们使用了我们的靶向定制的 180 个与 HL 相关基因的 MiamiOtoGenes 面板,对 23 个无血缘关系的伊朗近亲家庭进行了筛查,这些家庭至少有两个受影响的孩子,以确定 HL 的潜在致病变异。我们在 9 个具有不同 HL 特征的无血缘关系的家庭中发现了 7 个基因(,,, 和 )中的致病性变异。这些变异包括 5 个已报道的和 4 个新的突变。对于不适合传统连锁分析的小近亲家庭,MiamiOtoGenes 面板的使用有助于以具有成本效益和及时的方式确定 HL 的遗传原因。这种快速方法为大量 HL 患者提供了诊断,并确定了那些需要更广泛的遗传分析(如外显子组/基因组测序)的患者。

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本文引用的文献

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Curating Clinically Relevant Transcripts for the Interpretation of Sequence Variants.为序列变异解释精选临床相关转录本。
J Mol Diagn. 2018 Nov;20(6):789-801. doi: 10.1016/j.jmoldx.2018.06.005. Epub 2018 Aug 8.
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A novel missense mutation in GIPC3 causes sensorineural hearing loss in an Iranian family revealed by targeted next-generation sequencing.通过靶向新一代测序揭示,GIPC3基因中的一种新型错义突变导致一个伊朗家族出现感音神经性听力损失。
Int J Pediatr Otorhinolaryngol. 2018 May;108:8-11. doi: 10.1016/j.ijporl.2018.01.006. Epub 2018 Jan 31.
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Targeted Next-Generation Sequencing of a Deafness Gene Panel (MiamiOtoGenes) Analysis in Families Unsuitable for Linkage Analysis.针对不适合连锁分析的家族进行耳聋基因panel(MiamiOtoGenes)的靶向下一代测序分析。
Biomed Res Int. 2018 Jan 15;2018:3103986. doi: 10.1155/2018/3103986. eCollection 2018.
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Hum Genet. 2016 Aug;135(8):953-61. doi: 10.1007/s00439-016-1697-z. Epub 2016 Jun 25.
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Comprehensive genetic testing in the clinical evaluation of 1119 patients with hearing loss.对1119例听力损失患者进行临床评估时的综合基因检测。
Hum Genet. 2016 Apr;135(4):441-450. doi: 10.1007/s00439-016-1648-8. Epub 2016 Mar 11.
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A next-generation sequencing gene panel (MiamiOtoGenes) for comprehensive analysis of deafness genes.用于耳聋基因综合分析的下一代测序基因检测板(迈阿密耳科基因检测板)
Hear Res. 2016 Mar;333:179-184. doi: 10.1016/j.heares.2016.01.018. Epub 2016 Feb 2.
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