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化石生成型:古蛋白组学中用于解释因成岩作用而导致的蛋白质变化的一个新术语。

Diagenetiforms: A new term to explain protein changes as a result of diagenesis in paleoproteomics.

机构信息

Museum Conservation Institute, Smithsonian Institution, Suitland, MD 20746, United States of America.

Department of Biological Sciences, North Carolina State University, Raleigh, NC 27695, United States of America.

出版信息

J Proteomics. 2021 Jan 6;230:103992. doi: 10.1016/j.jprot.2020.103992. Epub 2020 Sep 28.

Abstract

The term proteoform describes all combinations of change in a protein, as elucidated through intact mass proteomics. Paleoproteomic studies have begun using digestion-free and top-down techniques to access information from ancient and historical remains. However, to discuss protein changes that uniquely occur to archaeological and paleontological proteomes as the result of diagenesis (i.e., physical and chemical change imparted by burial), a novel term is needed that both addresses issues of combinatorics and distinguishes diagenetic-specific alteration. SIGNIFICANCE: The term diagenetiform provides the opportunity to communicate clearly the sets of diagenetic changes found on preserved proteins. The diagenetiform nomenclature will allow for top-down paleoproteomic studies to accurately describe the total changes detected on ancient proteins.

摘要

术语“proteoform”描述了通过完整质量蛋白质组学阐明的蛋白质变化的所有组合。古蛋白质组学研究已经开始使用无消化和自上而下的技术来获取来自古代和历史遗迹的信息。然而,为了讨论由于成岩作用(即埋葬所赋予的物理和化学变化)而在考古和古蛋白组中特有的蛋白质变化,需要一个新的术语,该术语既要解决组合学问题,又要区分成岩作用特有的改变。意义:术语“diagenetiform”提供了一个清晰交流的机会,即在保存蛋白质上发现的一组组成岩作用变化。Diagenetiform 命名法将使自上而下的古蛋白质组学研究能够准确描述在古代蛋白质上检测到的总变化。

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