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木糖发酵中因转录调节因子缺失引起的代谢变化

Metabolic Changes Induced by Deletion of Transcriptional Regulator in Xylose-Fermenting .

作者信息

Shin Minhye, Kim Soo Rin

机构信息

Department of Agricultural Biotechnology, Research Institute of Agriculture and Life Science, Seoul National University, Seoul 08826, Korea.

School of Food Science and Biotechnology, Kyungpook National University, Daegu 41566, Korea.

出版信息

Microorganisms. 2020 Sep 29;8(10):1499. doi: 10.3390/microorganisms8101499.

Abstract

Glucose repression has been extensively studied in , including the regulatory systems responsible for efficient catabolism of glucose, the preferred carbon source. However, how these regulatory systems would alter central metabolism if new foreign pathways are introduced is unknown, and the regulatory networks between glycolysis and the pentose phosphate pathway, the two major pathways in central carbon metabolism, have not been systematically investigated. Here we disrupted , a key transcriptional regulator, in strain SR7 engineered to heterologously express the xylose-assimilating pathway, activating genes involved in glycolysis, and evaluated the global metabolic changes. deletion reduced cellular growth in glucose but significantly increased growth when xylose was the sole carbon source. Global metabolite profiling revealed differential regulation of yeast metabolism in SR7-, especially carbohydrate and nucleotide metabolism, depending on the carbon source. In glucose, the SR7- mutant showed overall decreased abundance of metabolites, such as pyruvate and sedoheptulose-7-phosphate, associated with central carbon metabolism including glycolysis and the pentose phosphate pathway. However, SR7- showed an increase in metabolites abundance (ribulose-5-phosphate, sedoheptulose-7-phosphate, and erythrose-4-phosphate) notably from the pentose phosphate pathway, as well as alteration in global metabolism when compared to SR7. These results provide insights into how the regulatory system coordinates the transcription of glycolytic genes and associated metabolic pathways.

摘要

葡萄糖阻遏在……中已得到广泛研究,包括负责葡萄糖(首选碳源)高效分解代谢的调控系统。然而,如果引入新的外源途径,这些调控系统将如何改变中心代谢尚不清楚,并且糖酵解和磷酸戊糖途径(中心碳代谢中的两条主要途径)之间的调控网络尚未得到系统研究。在这里,我们在经过工程改造以异源表达木糖同化途径的菌株SR7中破坏了一个关键转录调节因子,激活了参与糖酵解的基因,并评估了全局代谢变化。该调节因子的缺失降低了细胞在葡萄糖中的生长,但当木糖是唯一碳源时显著增加了生长。全局代谢物谱分析揭示了SR7 - 菌株中酵母代谢的差异调节,特别是碳水化合物和核苷酸代谢,这取决于碳源。在葡萄糖中,SR7 - 突变体显示与包括糖酵解和磷酸戊糖途径在内的中心碳代谢相关的代谢物丰度总体下降,如丙酮酸和景天庚酮糖 - 7 - 磷酸。然而,与SR7相比,SR7 - 显示出磷酸戊糖途径中代谢物丰度(5 - 磷酸核酮糖、景天庚酮糖 - 7 - 磷酸和4 - 磷酸赤藓糖)显著增加,以及全局代谢的改变。这些结果为该调控系统如何协调糖酵解基因的转录和相关代谢途径提供了见解。

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