Riva Francesco, Riva Valentina, Eckert Ester M, Colinas Noemi, Di Cesare Andrea, Borin Sara, Mapelli Francesca, Crotti Elena
Department of Food, Environmental and Nutritional Sciences (DeFENS), University of Milan, Milan, Italy.
Molecular Ecology Group, National Research Council - Water Research Institute (CNR-IRSA), Verbania, Italy.
Front Microbiol. 2020 Sep 3;11:574301. doi: 10.3389/fmicb.2020.574301. eCollection 2020.
The diffusion of antibiotic resistance determinants in different environments, e.g., soil and water, has become a public concern for global health and food safety and many efforts are currently devoted to clarify this complex ecological and evolutionary issue. Horizontal gene transfer (HGT) has an important role in the spread of antibiotic resistance genes (ARGs). However, among the different HGT mechanisms, the capacity of environmental bacteria to acquire naked exogenous DNA by natural competence is still poorly investigated. This study aimed to characterize the ability of the environmental strain ED1, isolated from the crustacean sp., to acquire exogenous DNA by natural competence. Transformation experiments were carried out varying different parameters, i.e., cell growth phase, amount of exogenous DNA and exposition to artificial lake water (ALW) and treated wastewater to mimic environmental-like conditions that may be encountered in the agri-food system. Results were compared with those showed by the laboratory strain DH5α. Our experimental data, supported by genomic sequencing, showed that, when exposed to pure water, ED1 strain was able to acquire exogenous DNA with frequencies (10-10) statistically higher than the ones observed for DH5α strain (10). Interestingly, higher values were retrieved for ED1 than DH5α strains exposed to ALW (10 vs. 10, respectively) or treated wastewater (10 vs. 10, respectively). We tested, therefore, ED1 strain ability to colonize the rhizosphere of lettuce, a model plant representative of raw-consumed vegetables of high economic importance in the ready-to-eat food industry. Results showed that ED1 strain was able to efficiently colonize lettuce rhizosphere, revealing a stable colonization for 14 days-long period. In conclusion, ED1 strain ability to acquire exogenous DNA in environmental-like conditions by natural competence, combined with its ability to efficiently and stably colonize plant rhizosphere, poses the attention to food and human safety showing a possible route of diffusion of antibiotic resistance in the agri-food system, sustaining the "One Health" warnings related to the antibiotic spread.
抗生素抗性决定因素在不同环境(如土壤和水)中的扩散已成为全球健康和食品安全的一个公共关注点,目前人们正在付出诸多努力来阐明这一复杂的生态和进化问题。水平基因转移(HGT)在抗生素抗性基因(ARG)的传播中起着重要作用。然而,在不同的HGT机制中,环境细菌通过自然感受态获取裸露外源DNA的能力仍未得到充分研究。本研究旨在表征从甲壳类动物中分离出的环境菌株ED1通过自然感受态获取外源DNA的能力。进行了转化实验,改变了不同参数,即细胞生长阶段、外源DNA的量以及暴露于人工湖水(ALW)和处理后的废水,以模拟农业食品系统中可能遇到的类似环境条件。将结果与实验室菌株DH5α的结果进行了比较。我们的实验数据在基因组测序的支持下表明,当暴露于纯水中时,ED1菌株能够以统计学上高于DH5α菌株(10)的频率(10-10)获取外源DNA。有趣的是,暴露于ALW(分别为10对10)或处理后的废水(分别为10对10)时,ED1菌株获得的值高于DH5α菌株。因此,我们测试了ED1菌株在生菜根际定殖的能力,生菜是即食食品行业中具有高经济重要性的生食蔬菜的典型代表植物。结果表明,ED1菌株能够有效地定殖在生菜根际,在长达14天的时间内显示出稳定的定殖。总之,ED1菌株在类似环境条件下通过自然感受态获取外源DNA的能力及其有效且稳定地定殖在植物根际的能力,引起了对食品和人类安全的关注,显示了抗生素抗性在农业食品系统中的一种可能扩散途径,支持了与抗生素传播相关的“同一健康”警告。