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色氨酸54和苯丙氨酸60协同参与大肠杆菌单链结合蛋白(SSB蛋白)与单链多核苷酸的结合。

Tryptophan 54 and phenylalanine 60 are involved synergistically in the binding of E. coli SSB protein to single-stranded polynucleotides.

作者信息

Casas-Finet J R, Khamis M I, Maki A H, Chase J W

出版信息

FEBS Lett. 1987 Aug 17;220(2):347-52. doi: 10.1016/0014-5793(87)80844-x.

DOI:10.1016/0014-5793(87)80844-x
PMID:3301414
Abstract

The binding of both wild-type and point-mutated E. coli single-stranded DNA-binding (SSB) protein to poly(deoxythymidylic acid) has been studied by fluorescence and optical detection of triplet state magnetic resonance spectroscopy. Involvement of tryptophan residues 40 and 54 in stacking interactions with nucleotide bases has been inferred earlier from such studies. Investigation of a point mutation in the E. coli SSB gene product obtained by site specific oligonucleotide mutagenesis in which Phe-60 is replaced by alanine strongly suggests the participation of Phe-60 in the binding process, possibly by the formation of an extended stacking structure by Trp-54, thymine and Phe-60. This hypothesis is supported by results on the point mutations in which His-55 is replaced by either leucine or tyrosine.

摘要

通过三重态磁共振光谱的荧光和光学检测,研究了野生型和点突变的大肠杆菌单链DNA结合(SSB)蛋白与聚(脱氧胸苷酸)的结合。此前从这类研究中推断,色氨酸残基40和54参与了与核苷酸碱基的堆积相互作用。对通过位点特异性寡核苷酸诱变获得的大肠杆菌SSB基因产物中的一个点突变进行研究,其中苯丙氨酸-60被丙氨酸取代,这强烈表明苯丙氨酸-60参与了结合过程,可能是通过色氨酸-54、胸腺嘧啶和苯丙氨酸-60形成延伸的堆积结构。这一假设得到了组氨酸-55被亮氨酸或酪氨酸取代的点突变结果的支持。

相似文献

1
Tryptophan 54 and phenylalanine 60 are involved synergistically in the binding of E. coli SSB protein to single-stranded polynucleotides.色氨酸54和苯丙氨酸60协同参与大肠杆菌单链结合蛋白(SSB蛋白)与单链多核苷酸的结合。
FEBS Lett. 1987 Aug 17;220(2):347-52. doi: 10.1016/0014-5793(87)80844-x.
2
Investigation of the role of individual tryptophan residues in the binding of Escherichia coli single-stranded DNA binding protein to single-stranded polynucleotides. A study by optical detection of magnetic resonance and site-selected mutagenesis.大肠杆菌单链DNA结合蛋白与单链多核苷酸结合中单个色氨酸残基作用的研究。通过磁共振光学检测和位点特异性诱变进行的一项研究。
J Biol Chem. 1987 Aug 15;262(23):10938-45.
3
Triplet state properties of tryptophan residues in complexes of mutated Escherichia coli single-stranded DNA binding proteins with single-stranded polynucleotides.突变型大肠杆菌单链DNA结合蛋白与单链多核苷酸复合物中色氨酸残基的三重态性质
Biophys J. 1989 May;55(5):927-36. doi: 10.1016/S0006-3495(89)82891-7.
4
Optically detected magnetic resonance of tryptophan residues in Escherichia coli ssb gene product and E. coli plasmid-encoded single-stranded DNA-binding proteins and their complexes with poly(deoxythymidylic) acid.大肠杆菌单链结合蛋白基因产物和大肠杆菌质粒编码的单链DNA结合蛋白中色氨酸残基的光学检测磁共振及其与聚(脱氧胸苷酸)的复合物。
J Biol Chem. 1987 Jun 25;262(18):8574-83.
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Role of tryptophan 54 in the binding of E. coli single-stranded DNA-binding protein to single-stranded polynucleotides.色氨酸54在大肠杆菌单链DNA结合蛋白与单链多核苷酸结合中的作用。
FEBS Lett. 1987 Jan 26;211(2):155-9. doi: 10.1016/0014-5793(87)81427-8.
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An IncY plasmid-encoded single-stranded DNA-binding protein from Escherichia coli shows the identical pattern of stacked tryptophan residues as the chromosomal ssb gene product.
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Modulation of the affinity of the single-stranded DNA-binding protein of Escherichia coli (E. coli SSB) to poly(dT) by site-directed mutagenesis.
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8
Triplet state sublevel kinetics of tryptophan 54 in the complex of Escherichia coli single-stranded DNA binding protein with single-stranded poly(deoxythymidylic) acid.大肠杆菌单链DNA结合蛋白与单链聚(脱氧胸苷酸)酸复合物中色氨酸54的三重态亚能级动力学
Biophys J. 1987 Nov;52(5):867-72. doi: 10.1016/S0006-3495(87)83280-0.
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Multiple binding modes of the single-stranded DNA binding protein from Escherichia coli as detected by tryptophan fluorescence and site-directed mutagenesis.通过色氨酸荧光和定点诱变检测大肠杆菌单链DNA结合蛋白的多种结合模式。
Biochemistry. 1993 Mar 16;32(10):2585-91. doi: 10.1021/bi00061a016.
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Optically detected magnetic resonance of tryptophan residues in complexes formed between a bacterial single-stranded DNA binding protein and heavy atom modified poly(uridylic acid).
Biochemistry. 1987 Jun 16;26(12):3347-54. doi: 10.1021/bi00386a015.

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