State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, PR China.
School of Life Sciences, Zhengzhou University, Zhengzhou, PR China.
Int J Syst Evol Microbiol. 2020 Nov;70(11):5943-5949. doi: 10.1099/ijsem.0.004500.
A novel Gram-stain-negative, strictly aerobic, rod-shaped, brick red-pigmented bacterium, designated R-22-1 c-1, was isolated from water from Baiyang Lake, Hebei Province, PR China. The strain was able to grow at 20-30 °C (optimum, 30 °C) and pH 6-7 (optimum, pH 6) in Reasoner's 2A medium. 16S rRNA gene sequence and phylogenetic analyses of R-22-1 c-1 revealed closest relationships to MCC P1 (97.8 %), H-1 (97.9 %) and MDT1-10-3 (97.0 %), with other species of the genus showing less than 97.0 % sequence similarity. The predominant polar lipids were phosphatidylethanolamine, two unidentified aminophospholipids and three unidentified lipids. The major cellular fatty acids were iso-C, C 6, C 6, anteiso-C, summed feature 3 (iso-C 2-OH and/or C 7 and/or C 6) and summed feature 4 (iso-CI and/or anteiso-CB). The respiratory quinone was MK-7. The draft genome of R-22-1 c-1 was 5.6 Mbp in size, with a G+C content of 50.2 mol%. The average nucleotide identity and digital DNA-DNA hybridization relatedness values between strain R-22-1 c-1 and related type strains were MCC P1 (77.2 and 21.8 %), H-1 (81.6 and 21.4 %) and 1351 (78.5 and 22.9 %). Based on these phylogenetic, chemotaxonomic and genotypic results, strain R-22-1 c-1 represents a novel species in the genus , for which the name sp. nov. is proposed. The type strain is R-22-1 c-1 (=CGMCC 1.13570=KCTC 62781).
一株新型革兰氏阴性、严格需氧、杆状、砖红色的细菌,被命名为 R-22-1 c-1,从中国河北省白洋淀的水中分离得到。该菌株能够在 Reasoner 2A 培养基中 20-30°C(最佳温度为 30°C)和 pH6-7(最佳 pH 值为 6)的条件下生长。通过 16S rRNA 基因序列和系统发育分析,R-22-1 c-1 与 MCC P1(97.8%)、H-1(97.9%)和 MDT1-10-3(97.0%)最为接近,与其他属的种的序列相似度均小于 97.0%。主要极性脂为磷脂酰乙醇胺、两种未鉴定的氨基磷脂和三种未鉴定的脂类。主要细胞脂肪酸为 iso-C、C 6 、C 6 、anteiso-C、特征性 3(iso-C 2-OH 和/或 C 7 和/或 C 6)和特征性 4(iso-CI 和/或 anteiso-CB)。呼吸醌为 MK-7。R-22-1 c-1 的基因组草图大小为 5.6 Mbp,G+C 含量为 50.2 mol%。与相关模式菌株 MCC P1(77.2%和 21.8%)、H-1(81.6%和 21.4%)和 1351(78.5%和 22.9%)相比,菌株 R-22-1 c-1 的平均核苷酸同一性和数字 DNA-DNA 杂交相关性值分别为 77.2%和 21.8%、81.6%和 21.4%和 78.5%和 22.9%。基于这些系统发育、化学分类学和基因型结果,菌株 R-22-1 c-1 代表了属内的一个新种,因此建议命名为 sp. nov.。模式菌株为 R-22-1 c-1(=CGMCC 1.13570=KCTC 62781)。