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新种和新种,从沙漠土壤中分离得到。

sp. nov. and sp. nov., isolated from desert soil.

机构信息

School of Life Science, Jiaying University, Meizhou, PR China.

State Key Laboratory of Biocontrol, Guangdong Provincial Key Laboratory of Plant Resources and Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), School of Life Sciences, Sun Yat-sen University, Guangzhou, PR China.

出版信息

Int J Syst Evol Microbiol. 2023 Oct;73(10). doi: 10.1099/ijsem.0.006093.

Abstract

Two novel bacterial strains, designated as SYSU D00344 and SYSU D00433, were isolated from soil of Gurbantunggut Desert in Xinjiang, north-west PR China. Cells of both strains were Gram-stain-negative, aerobic, short-rod-shaped, catalase-positive and non-motile. Oxidase activities of SYSU D00344 and SYSU D00433 were negative and positive, respectively. Optimal growth occurred at 30 °C, with 0-0.5 % (w/v) NaCl and at pH 7.0. The results of phylogenetic analysis of 16S rRNA gene sequences indicated that they represented members of the genus and were closely related to NBS58-1. The results of phylogenomic analysis indicated that the two strains formed two independent and robust branches distinct from all reference type strains. The analyses of average nucleotide identity (ANI), digital DNA-DNA hybridisation (dDDH) values and 16S rRNA gene similarities between the two strains and their relatives further demonstrated that SYSU D00344 and SYSU D00433 represented two different novel genospecies. The polar lipids consisted of phosphatidylethanolamine, one unidentified glycolipid, two unidentified aminophospholipids, and two or four unidentified lipids. MK-7 was the only respiratory quinone. The major fatty acids (>10 %) for both strains were identified as iso-C, anteiso-C and summed feature 3 (Cω7 and/or Cω6), as well as summed feature 4 (anteiso-CB and/or iso-CI) for SYSU D00344 and Cω5 for SYSU D00433. On the basis of the phylogenetic, phenotypic, chemotaxonomic and genotypic characteristics, we propose sp. nov. and sp. nov. as two novel species in the genus . The type strains are SYSU D00344 (=CGMCC 1.8625=MCCC 1K04971=KCTC 82274) and SYSU D00433 (=CGMCC 1.8617=MCCC 1K04982=KCTC 82277), respectively.

摘要

两株新的细菌菌株,分别命名为 SYSU D00344 和 SYSU D00433,从中国西北部新疆古尔班通古特沙漠的土壤中分离出来。这两株菌的细胞均为革兰氏阴性、需氧、短杆状、接触酶阳性且不运动。SYSU D00344 和 SYSU D00433 的氧化酶活性分别为阴性和阳性。最佳生长条件为 30°C、0-0.5%(w/v)NaCl 和 pH7.0。16S rRNA 基因序列的系统发育分析结果表明,它们代表属的成员,与 NBS58-1 密切相关。系统基因组分析结果表明,这两株菌形成了两个独立且强大的分支,与所有参考模式株明显不同。两株菌及其亲缘关系的平均核苷酸同一性 (ANI)、数字 DNA-DNA 杂交 (dDDH) 值和 16S rRNA 基因相似性分析进一步表明,SYSU D00344 和 SYSU D00433 代表两个不同的新种。极性脂由磷脂酰乙醇胺、一种未鉴定的糖脂、两种未鉴定的氨基磷脂和两种或四种未鉴定的脂组成。MK-7 是唯一的呼吸醌。两株菌的主要脂肪酸(>10%)为 iso-C、anteiso-C 和 sum feature 3(Cω7 和/或 Cω6),以及 sum feature 4(anteiso-CB 和/或 iso-CI),SYSU D00344 为 Cω5。基于系统发育、表型、化学分类和基因型特征,我们提出 sp. nov. 和 sp. nov. 作为属的两个新种。模式菌株分别为 SYSU D00344(=CGMCC 1.8625=MCCC 1K04971=KCTC 82274)和 SYSU D00433(=CGMCC 1.8617=MCCC 1K04982=KCTC 82277)。

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