Antonacci Yuri, Faes Luca, Astolfi Laura
Annu Int Conf IEEE Eng Med Biol Soc. 2020 Jul;2020:26-29. doi: 10.1109/EMBC44109.2020.9176114.
The framework of information dynamics allows to quantify different aspects of the statistical structure of multivariate processes reflecting the temporal dynamics of a complex network. The information transfer from one process to another can be quantified through Transfer Entropy, and under the assumption of joint Gaussian variables it is strictly related to the concept of Granger Causality (GC). According to the most recent developments in the field, the computation of GC entails representing the processes through a Vector Autoregressive (VAR) model and a state space (SS) model typically identified by means of the Ordinary Least Squares (OLS). In this work, we propose a new identification approach for the VAR and SS models, based on Least Absolute Shrinkage and Selection Operator (LASSO), that has the advantages of maintaining good accuracy even when few data samples are available and yielding as output a sparse matrix of estimated information transfer. The performances of LASSO identification were first tested and compared to those of OLS by a simulation study and then validated on real electroencephalographic (EEG) signals recorded during a motor imagery task. Both studies indicated that LASSO, under conditions of data paucity, provides better performances in terms of network structure. Given the general nature of the model, this work opens the way to the use of LASSO regression for the computation of several measures of information dynamics currently in use in computational neuroscience.
信息动力学框架允许对反映复杂网络时间动态的多元过程统计结构的不同方面进行量化。从一个过程到另一个过程的信息传递可以通过转移熵来量化,并且在联合高斯变量的假设下,它与格兰杰因果关系(GC)的概念严格相关。根据该领域的最新进展,GC的计算需要通过向量自回归(VAR)模型和通常通过普通最小二乘法(OLS)识别的状态空间(SS)模型来表示过程。在这项工作中,我们提出了一种基于最小绝对收缩和选择算子(LASSO)的VAR和SS模型的新识别方法,该方法具有即使在可用数据样本很少时也能保持良好准确性的优点,并且输出一个估计信息传递的稀疏矩阵。首先通过模拟研究测试了LASSO识别的性能,并将其与OLS的性能进行了比较,然后在运动想象任务期间记录的真实脑电图(EEG)信号上进行了验证。两项研究均表明,在数据匮乏的情况下,LASSO在网络结构方面提供了更好的性能。鉴于该模型的通用性,这项工作为使用LASSO回归来计算计算神经科学中目前使用的几种信息动力学度量开辟了道路。