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使用机器学习方法对创伤性脑损伤小鼠模型中的脑电图进行分类

Classification of Electroencephalogram in a Mouse Model of Traumatic Brain Injury Using Machine Learning Approaches.

作者信息

Vishwanath Manoj, Jafarlou Salar, Shin Ikhwan, Dutt Nikil, Rahmani Amir M, Lim Miranda M, Cao Hung

出版信息

Annu Int Conf IEEE Eng Med Biol Soc. 2020 Jul;2020:3335-3338. doi: 10.1109/EMBC44109.2020.9175915.

Abstract

Traumatic Brain Injury (TBI) is highly prevalent, affecting ~1% of the U.S. population, with lifetime economic costs estimated to be over $75 billion. In the U.S., there are about 50,000 deaths annually related to TBI, and many others are permanently disabled. However, it is currently unknown which individuals will develop persistent disability following TBI and what brain mechanisms underlie these distinct populations. The pathophysiologic causes for those are most likely multifactorial. Electroencephalogram (EEG) has been used as a promising quantitative measure for TBI diagnosis and prognosis. The recent rise of advanced data science approaches such as machine learning and deep learning holds promise to further analyze EEG data, looking for EEG biomarkers of neurological disease, including TBI. In this work, we investigated various machine learning approaches on our unique 24-hour recording dataset of a mouse TBI model, in order to look for an optimal scheme in classification of TBI and control subjects. The epoch lengths were 1 and 2 minutes. The results were promising with accuracy of ~80-90% when appropriate features and parameters were used using a small number of subjects (5 shams and 4 TBIs). We are thus confident that, with more data and studies, we would be able to detect TBI accurately, not only via long-term recordings but also in practical scenarios, with EEG data obtained from simple wearables in the daily life.

摘要

创伤性脑损伤(TBI)非常普遍,影响着约1%的美国人口,终生经济成本估计超过750亿美元。在美国,每年约有5万人死于TBI,还有许多人永久致残。然而,目前尚不清楚哪些个体在TBI后会发展为持续性残疾,以及这些不同人群背后的脑机制是什么。其病理生理原因很可能是多因素的。脑电图(EEG)已被用作TBI诊断和预后的一种有前景的定量测量方法。机器学习和深度学习等先进数据科学方法的近期兴起有望进一步分析EEG数据,寻找包括TBI在内的神经疾病的EEG生物标志物。在这项工作中,我们在小鼠TBI模型的独特24小时记录数据集上研究了各种机器学习方法,以寻找TBI和对照受试者分类的最佳方案。时段长度为1分钟和2分钟。当使用少量受试者(5只假手术小鼠和4只TBI小鼠)并采用适当的特征和参数时,结果很有前景,准确率约为80%-90%。因此,我们相信,通过更多的数据和研究,我们将能够准确检测TBI,不仅可以通过长期记录,而且在实际场景中,利用日常生活中简单可穿戴设备获得的EEG数据也能做到。

相似文献

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Electrophysiologic recordings in traumatic brain injury.创伤性脑损伤中的电生理记录
Handb Clin Neurol. 2015;127:319-39. doi: 10.1016/B978-0-444-52892-6.00021-0.

本文引用的文献

2
EEG slow waves in traumatic brain injury: Convergent findings in mouse and man.创伤性脑损伤中的脑电图慢波:小鼠与人的一致发现
Neurobiol Sleep Circadian Rhythms. 2016 Jul 1;2:59-70. doi: 10.1016/j.nbscr.2016.06.001. eCollection 2017 Jan.

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