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通过分子建模方法探索 17β-HSD5 诱导卡他碱致癌性的分子机制。

Exploring the Molecular Mechanisms of 17β-HSD5-induced Carcinogenicity of Catha edulis via Molecular Modeling Approach.

机构信息

Dr. Pajwani Center for Molecular Medicine and Drug Research, ICCBS, University of Karachi, Karachi-75270, Pakistan.

Substance Abuse and Toxicology Research Centre, Jazan University, P.O. Box 114, Postal Code: 45142, Jazan, Saudi Arabia.

出版信息

Med Chem. 2021;17(4):418-428. doi: 10.2174/1573406416666201005142522.

Abstract

BACKGROUND

The tradition of khat chewing has been deep-rooted in the African and Arabian Peninsula for centuries. Due to its amphetamine-like psycho-stimulant or euphoric effect, khat has been used by millions in Somalia, Ethiopia, Saudi Arabia and Yemen. The long-term use of khat can induce many major health outcomes, which may be serious and irreversible.

OBJECTIVE

Prolonged use of khat constituents has been associated with different types of cancers such as prostatic, breast and ovarian cancer. However, it has been very difficult to identify the molecular targets involved in khat carcinogenesis that interact with the Khat constituents by in vitro/in vivo experimental tools.

METHODS

In silico tools were used to predict potential targets involved in the carcinogenesis of khat. Pass on-line prediction server was used for the prediction of a potential molecular target for khat constituents. Molecular Dynamics simulation and MM-GBSA calculation of the predicted target were carried out.

RESULTS

Molecular Dynamics simulation and MM-GBSA calculation revealed that among khat constituents, β-sitosterol showed a high binding affinity towards 17β-HSD5. On the other hand, this study highlights for the first time some new interactions, which were observed in the case of cathine, cathinone and nerol during the simulation.

CONCLUSION

In silico molecular dynamic simulation tools were used for the first time to investigate the molecular mechanism of widely used leaves of psychoactive khat (Catha edulis) constituent. The present study provides deep insight to understand the effect of khat constituents involved in the impairment of the reproductive system and its binding to 17β-HSD5. ADMET profiling also suggested that few khat constituents do not fulfill the requirements of the Lipinski rule of five i.e. poor absorption and blood-brain barrier impermeability.

摘要

背景

几个世纪以来,阿拉伯半岛和非洲地区一直存在着咀嚼卡特叶的传统。由于其类似安非他命的致幻或兴奋作用,卡特叶被索马里、埃塞俄比亚、沙特阿拉伯和也门数百万人使用。长期使用卡特叶会导致许多严重的健康后果,这些后果可能是严重且不可逆转的。

目的

卡特叶的长期使用与前列腺癌、乳腺癌和卵巢癌等不同类型的癌症有关。然而,通过体外/体内实验工具来识别与卡特叶成分相互作用的参与卡特叶致癌作用的分子靶标非常困难。

方法

使用计算机模拟工具来预测卡特叶致癌作用中涉及的潜在靶标。使用在线预测服务器来预测卡特叶成分的潜在分子靶标。对预测的靶标进行分子动力学模拟和 MM-GBSA 计算。

结果

分子动力学模拟和 MM-GBSA 计算表明,在卡特叶成分中,β-谷甾醇对 17β-HSD5 具有高结合亲和力。另一方面,本研究首次强调了一些新的相互作用,这些相互作用在模拟过程中观察到了瓜拉那碱、去甲伪麻黄碱和橙花叔醇的情况。

结论

本研究首次使用计算机模拟分子动力学工具来研究广泛使用的兴奋叶卡特叶(Catha edulis)成分的分子机制。本研究深入了解了卡特叶成分对生殖系统的损害及其与 17β-HSD5 的结合的作用机制。ADMET 分析也表明,少数卡特叶成分不符合 Lipinski 五规则的要求,即吸收不良和血脑屏障通透性差。

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