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对提供了对增生性骨硬化症致病机制的深入了解。

Genome Sequencing of Provides Insights into the Pathogenic Mechanisms of Hypertrophy Sorosis Scleroteniosis.

机构信息

The State Key Laboratory of Silkworm Genome Biology, College of Biotechnology, Southwest University, Chongqing, China.

Key Laboratory of Biorheological Science and Technology, Ministry of Education, Chongqing University, Chongqing, China.

出版信息

Mol Plant Microbe Interact. 2021 Jan;34(1):62-74. doi: 10.1094/MPMI-07-20-0201-R. Epub 2020 Nov 23.

Abstract

causes hypertrophy sorosis scleroteniosis in mulberry trees, resulting in huge economic losses, and exploring its pathogenic mechanism at a genomic level is important for developing new control methods. Here, genome sequencing of based on PacBio RSII and Illumina HiSeq 2500 platform as well as manual gap filling was performed. Synteny analysis with revealed 16 putative chromosomes corresponding to 16 chromosomes of . Screening of rapid-evolution genes revealed that 97 and 2.4% of genes had undergone purifying selection and positive selection, respectively. When compared with , fewer secreted effector proteins were found in . The number of genes involved in pathogenicity, including secondary metabolites, carbohydrate active enzymes, and P450s, in the genome was comparable with that of other necrotrophs but higher than that of biotrophs and saprotrophs. The growth-related genes and plant cell-wall-degradation-related genes in were expressed in different developmental and infection stages, and may be potential targets for prevention and control of this pathogen. These results provide new insights into pathogenic mechanisms, especially host range and necrotrophy features, and lay the foundation for further study of the underlying molecular mechanisms.[Formula: see text] The author(s) have dedicated the work to the public domain under the Creative Commons CC0 "No Rights Reserved" license by waiving all of his or her rights to the work worldwide under copyright law, including all related and neighboring rights, to the extent allowed by law.

摘要

该菌会引起桑树的细胞肥大、组织硬化,给桑产业造成巨大的经济损失。因此,从基因组水平上探索其致病机制对于开发新的防治方法具有重要意义。本研究基于 PacBio RSII 和 Illumina HiSeq 2500 平台对进行了全基因组测序和人工 gap 填充,然后与进行了同线性分析,结果显示其有 16 条染色体,与的 16 条染色体相对应。快速进化基因筛选结果表明,分别有 97%和 2.4%的基因经历了纯化选择和正选择。与其他真菌相比,在中发现的分泌效应蛋白较少。在的基因组中,与致病性相关的基因,包括次生代谢物、碳水化合物活性酶和 P450s 的数量与其他坏死真菌相当,但高于生物和腐生真菌。与生长相关的基因和与植物细胞壁降解相关的基因在不同的发育和感染阶段表达,可能是防治这种病原体的潜在靶标。这些结果为进一步研究其致病机制,特别是宿主范围和坏死营养特性提供了新的思路,并为深入研究其潜在的分子机制奠定了基础。[公式:见正文]作者已将该作品贡献给公众领域,根据知识共享署名 4.0 国际许可协议,在适用法律允许的范围内,放弃其在全球范围内基于著作权法对该作品享有的所有权利,包括所有相关和邻接的权利。

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