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深度学习在扫描电子显微镜中的应用:用于纳米颗粒检测的合成数据。

Deep learning for scanning electron microscopy: Synthetic data for the nanoparticles detection.

机构信息

National Research Nuclear University "MEPhI", 115409 Moscow, Russia.

出版信息

Ultramicroscopy. 2020 Dec;219:113125. doi: 10.1016/j.ultramic.2020.113125. Epub 2020 Sep 25.

Abstract

Deep learning algorithms are one of most rapid developing fields into the modern computation technologies. One of the bottlenecks into the implementation of such advaced algorithms is their requirement for a large amount of manually-labelled data for training. For the general-purpose tasks, such as general purpose image classification/detection the huge images datasets are already labelled and collected. For more subject specific tasks (such as electron microscopy images treatment), no labelled data available. Here I demonstrate that a deep learning network can be successfully trained for nanoparticles detection using semi-synthetic data. The real SEM images were used as a textures for rendered nanoparticles at the surface. Training of RetinaNet architecture using transfer learning can be helpful for the large-scale particle distribution analysis. Beyond such applications, the presented approach might be applicable to other tasks, such as image segmentation.

摘要

深度学习算法是现代计算技术中发展最快的领域之一。这类先进算法的实施瓶颈之一是它们需要大量人工标记的数据来进行训练。对于通用任务,例如通用图像分类/检测,已经有大量标记和收集的图像数据集。对于更特定于主题的任务(例如电子显微镜图像处理),则没有可用的标记数据。在这里,我证明了可以使用半合成数据成功训练用于检测纳米颗粒的深度学习网络。真实的 SEM 图像被用作表面渲染纳米颗粒的纹理。使用迁移学习训练 RetinaNet 架构有助于进行大规模的颗粒分布分析。除了这些应用之外,所提出的方法可能适用于其他任务,例如图像分割。

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