Human and Animal Physiology, Wageningen University & Research, Wageningen, 6708 WD, The Netherlands.
Department of Pathology, University of Michigan, Ann Arbor, MI, 48109, USA.
Sci Rep. 2020 Oct 12;10(1):17030. doi: 10.1038/s41598-020-72833-7.
Succinylation is a novel post-translational modification identified on many proteins and is involved in multiple biological processes. Succinylation levels are dynamically regulated, balanced by succinylation and desuccinylation processes, and are closely connected to metabolic state in vivo. Sirtuins have been shown to possess NAD-dependent desuccinylation activity in vitro and in vivo, among which the desuccinylation activity of SIRT5 is most extensively studied. Our understanding of the response of succinylation levels to different metabolic conditions, is hampered by the lack of a fast NAD-dependent desuccinylation assay in a physiological context. In the present study, we therefore optimized and validated a fluorescence-based assay for measuring NAD-dependent desuccinylation activity in cell lysates. Our results demonstrated that shorter and stricter reaction time was critical to approach the initial rate of NAD-dependent desuccinylation activity in crude cell lysate systems, as compared to the desuccinylation reaction of purified His-SIRT5. Analysis of desuccinylation activity in SIRT5 knockout HEK293T cells confirmed the relevance of SIRT5 in cellular desuccinylation activity, as well as the presence of other NAD-dependent desuccinylase activities. In addition, we were able to analyse desuccinylation and deacetylation activity in multiple cell lines using this assay. We showed a remarkably higher desuccinylase activity, but not deacetylase activity, in proliferative cultured muscle and adipose cells in comparison with their differentiated counterparts. Our results reveal an alteration in NAD-dependent desuccinylation activity under different metabolic states.
琥珀酰化是一种新发现的存在于许多蛋白质上的翻译后修饰,参与多种生物学过程。琥珀酰化水平是动态调节的,由琥珀酰化和脱琥珀酰化过程平衡,与体内代谢状态密切相关。研究表明,Sirtuins 在体外和体内具有 NAD 依赖性脱琥珀酰化活性,其中 SIRT5 的脱琥珀酰化活性研究最为广泛。由于缺乏生理条件下快速的 NAD 依赖性脱琥珀酰化测定方法,我们对琥珀酰化水平对不同代谢条件的反应的理解受到了阻碍。在本研究中,我们因此优化并验证了一种用于测量细胞裂解物中 NAD 依赖性脱琥珀酰化活性的荧光测定法。我们的结果表明,与纯化的 His-SIRT5 的脱琥珀酰化反应相比,在粗细胞裂解物系统中,更短和更严格的反应时间对于接近 NAD 依赖性脱琥珀酰化活性的初始速率至关重要。SIRT5 敲除 HEK293T 细胞中脱琥珀酰化活性的分析证实了 SIRT5 在细胞脱琥珀酰化活性中的相关性,以及其他 NAD 依赖性脱琥珀酰酶活性的存在。此外,我们能够使用该测定法分析多种细胞系中的脱琥珀酰化和去乙酰化活性。与分化细胞相比,我们在增殖培养的肌肉和脂肪细胞中观察到明显更高的脱琥珀酰化酶活性,但去乙酰化酶活性没有变化。我们的结果揭示了不同代谢状态下 NAD 依赖性脱琥珀酰化活性的改变。