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实时荧光定量PCR检测草坪草币斑病病原菌**种名**(原文此处 spp. 未明确具体内容,无法准确翻译完整学名)

Real-Time PCR Detection of spp., the Causal Agents of Dollar Spot in Turfgrasses.

作者信息

Groben Glen, Clarke Bruce B, Murphy James, Koch Paul, Crouch Jo Anne, Lee Sangkook, Zhang Ning

机构信息

Department of Plant Biology, Rutgers University, New Brunswick, NJ 08901, U.S.A.

Department of Plant Pathology, University of Wisconsin-Madison, Madison, WI 53706, U.S.A.

出版信息

Plant Dis. 2020 Dec;104(12):3118-3123. doi: 10.1094/PDIS-04-20-0726-RE. Epub 2020 Oct 15.

Abstract

Dollar spot is one of the most economically important diseases of turfgrasses. Recent taxonomic revisions have placed the dollar spot fungal pathogens in the new genus , with five species described. The main goal of this study was to develop a quantitative real-time PCR (qPCR) molecular detection assay based on the internal transcribed spacer (ITS) of the ribosomal RNA genes to quantify the abundance of spp. from environmental (field) samples. The qPCR assay was able to detect isolates of the four tested spp. but did not cross react with nontarget fungi, including closely related taxa, other turfgrass pathogens, or other fungal species commonly isolated from turfgrass. The assay is capable of detecting as little as 38.0 fg (3.8 × 10 g) of genomic DNA in 3 h. The qPCR assay detected spp. in both symptomatic and asymptomatic creeping bentgrass () foliar tissue. spp. were rarely detected in the thatch or soil, indicating that these pathogens are not widely distributed in these areas of the environment. The fact that the pathogen was detected in asymptomatic tissue suggests that creeping bentgrass may be able to tolerate a certain quantity of the pathogens in leaves before disease symptoms appear; however, further research is needed to validate this hypothesis.

摘要

钱斑病是草坪草最重要的经济病害之一。最近的分类学修订将钱斑病真菌病原体归入了一个新属,已描述了五个物种。本研究的主要目标是基于核糖体RNA基因的内转录间隔区(ITS)开发一种定量实时PCR(qPCR)分子检测方法,以量化环境(田间)样品中 spp. 的丰度。该qPCR检测方法能够检测出四种受试 spp. 的分离株,但与非靶标真菌无交叉反应,包括近缘类群、其他草坪草病原体或通常从草坪草中分离出的其他真菌物种。该检测方法能够在3小时内检测到低至38.0 fg(3.8×10 g)的 基因组DNA。qPCR检测方法在有症状和无症状的匍匐翦股颖()叶片组织中均检测到了 spp.。在枯草层或土壤中很少检测到 spp.,这表明这些病原体在这些环境区域中分布不广泛。在无症状组织中检测到病原体这一事实表明,匍匐翦股颖在疾病症状出现之前可能能够耐受叶片中一定数量的病原体;然而,需要进一步研究来验证这一假设。

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