Vasilchenko Alexey S, Julian William T, Lapchinskaya Olda A, Katrukha Genrikh S, Sadykova Vera S, Rogozhin Eugene A
Laboratory of Antimicrobial Resistance, Institute of Environmental and Agricultural Biology (X-BIO), Tyumen State University, Tyumen, Russia.
Gause Institute of New Antibiotics, Moscow, Russia.
Front Microbiol. 2020 Sep 15;11:556063. doi: 10.3389/fmicb.2020.556063. eCollection 2020.
In this work, we report the isolation and detailed functional characterization for the new non-ribosomally synthesized antibiotic 5812-A/C, which was derived from metabolites of INA-Ac-5812. According to its chemical structure, the studied 5812-A/C preliminary is composed of a cyclic peptide part covalently bounded with an arabinose residue. N-terminal amino acid sequencing of the native peptide has identified its partial structure of Leu-Asp-Gly-Ser-Gly and consisting of a Tyr residue that is supposed to have a two-component peptide nature for the molecule studied. However, the structural analysis of the antibiotic complex derived from INA-Ac-5812 is still ongoing. The mechanism of action of 5812-A/C was assessed in comparison with its most related analog, the lipopeptide antibiotic daptomycin, given the presence in both antimicrobials of an L-kynurenine amino acid residue. The inhibitory activity of 5812-A/C against Gram-positive bacteria including methicillin-resistant strain of was similar to daptomycin. The mechanism of action of 5812-A/C was associated with the disruption of membrane integrity, which differs in comparison with daptomycin and is most similar to the antimicrobial membrane-disturbing peptides. However, 5812-A/C demonstrated a calcium-dependent mode of action. In addition, unlike daptomycin, 5812-A/C was able to penetrate mature biofilms and inhibit the metabolic activity of embedded cells. At the same time, 5812-A/C has no hemolytic activity toward erythrocyte, but possessed weak cytotoxic activity represented by heterochromatin condensation in human buccal epithelium cells. The biological properties of the peptide 5812-A/C suggest its classification as a calcium-dependent antibiotic effective against a wide spectrum of Gram-positive pathogenic bacteria.
在本研究中,我们报告了从INA-Ac-5812的代谢产物中分离得到的新型非核糖体合成抗生素5812-A/C及其详细的功能特性。根据其化学结构,所研究的5812-A/C初步由一个与阿拉伯糖残基共价结合的环肽部分组成。天然肽的N端氨基酸测序确定了其Leu-Asp-Gly-Ser-Gly的部分结构,并由一个酪氨酸残基组成,该分子被认为具有双组分肽的性质。然而,源自INA-Ac-5812的抗生素复合物的结构分析仍在进行中。鉴于两种抗菌药物中都存在L-犬尿氨酸氨基酸残基,我们将5812-A/C的作用机制与其最相关的类似物脂肽抗生素达托霉素进行了比较评估。5812-A/C对包括耐甲氧西林菌株在内的革兰氏阳性菌的抑制活性与达托霉素相似。5812-A/C的作用机制与膜完整性的破坏有关,这与达托霉素不同,与抗菌膜干扰肽最为相似。然而,5812-A/C表现出钙依赖性作用模式。此外,与达托霉素不同,5812-A/C能够穿透成熟生物膜并抑制嵌入细胞的代谢活性。同时,5812-A/C对红细胞没有溶血活性,但在人颊上皮细胞中表现出以异染色质凝聚为代表的弱细胞毒性活性。肽5812-A/C的生物学特性表明其可归类为一种对多种革兰氏阳性病原菌有效的钙依赖性抗生素。