Jeon Byeong Jun, Yoo Nayeon, Kim Jeong Do, Choi Jaeyoung
Smart Farm Research Center, Korea Institute of Science and Technology, Gangneung, Republic of Korea.
Department of Plant Biotechnology, Korea University, Seoul, Republic of Korea.
Front Plant Sci. 2023 Oct 5;14:1250906. doi: 10.3389/fpls.2023.1250906. eCollection 2023.
The genus has been unceasingly highlighted for the versatility and diversity of the antimicrobial agents they produce. Moreover, it is a heavily sequenced taxon in the phylum Actinobacteria. In this study, 47 sequence profiles were identified as proteins highly conserved within the genus Significant hits to the 38 profiles were found in more than 2000 genomes, 11 of which were further conserved in more than 90% of Actinobacterial genomes analyzed. Only a few genes corresponding to these sequence profiles were functionally characterized, which play regulatory roles in the morphology and biosynthesis of antibiotics. Here a highly conserved sequence, namely, SHC-AMP ( highly conserved antimicrobial peptide), which exhibited antimicrobial activity against bacterial and fungal plant pathogens, was reported. In particular, was effectively protected against infection with pv. DC3000 by treatment with this peptide. Results indicated the potential application of this peptide as an antimicrobial agent for control of plant diseases. Our results suggest putative target genes for controlling spp., including the one exhibiting antimicrobial activity against a wide range of phytopathogens.
该属因其产生的抗菌剂的多功能性和多样性而一直备受关注。此外,它是放线菌门中一个测序量很大的分类单元。在本研究中,47个序列图谱被鉴定为该属内高度保守的蛋白质。在2000多个该属基因组中发现了与38个图谱的显著匹配,其中11个在分析的90%以上的放线菌基因组中进一步保守。与这些序列图谱对应的只有少数基因具有功能特征,它们在抗生素的形态和生物合成中起调节作用。在此报道了一个高度保守的序列,即SHC-AMP(高度保守的抗菌肽),它对细菌和真菌植物病原体具有抗菌活性。特别是,用该肽处理可有效保护植物免受丁香假单胞菌番茄致病变种pv. tomato DC3000的感染。结果表明该肽作为一种控制植物病害的抗菌剂具有潜在应用价值。我们的结果提示了控制该属物种的假定靶基因,包括一个对多种植物病原体具有抗菌活性的基因。