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基因芯片分析揭示了中风后遭受社会隔离的老年雄性和雌性小鼠中不同的循环微小RNA。

Microarray Profiling Reveals Distinct Circulating miRNAs in Aged Male and Female Mice Subjected to Post-stroke Social Isolation.

作者信息

Banerjee Anik, Chokkalla Anil K, Shi Julia J, Lee Juneyoung, Venna Venugopal Reddy, Vemuganti Raghu, McCullough Louise D

机构信息

Department of Neurology, McGovern Medical School, The University of Texas Health Science Center at Houston, Houston, TX, 77030, USA.

Department of Neurological Surgery, University of Wisconsin, Madison, WI, USA.

出版信息

Neuromolecular Med. 2021 Jun;23(2):305-314. doi: 10.1007/s12017-020-08622-2. Epub 2020 Oct 19.

DOI:10.1007/s12017-020-08622-2
PMID:33074466
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8843110/
Abstract

Social isolation (SI) increases ischemic injury and significantly delays recovery after experimental stroke. Changes in circulating microRNAs (miRNAs) have been implicated in several neurological disorders, including stroke. However, potential biomarkers to elucidate the mechanisms that underlie the detrimental effects of post-stroke isolation are unknown. Aged C57BL/6 male and female mice (18-20 months) were subjected to a 60-min middle cerebral artery occlusion followed by reperfusion and were assigned to either isolation (SI) or continued pair housing (PH) immediately after stroke. On day 15, mice were sacrificed, and plasma samples were collected for miRNAome analysis. Top candidate miRNAs and their biological functions were identified using integrated bioinformatics. The miRNAome analysis revealed a total of 21 differentially expressed miRNAs across both sexes with fold change of 3 or higher. Within the female cohort, miR-206-3p, -376a-3p, -34b-5p, -133a-5p, -466f, and -671-3p were highly altered relative to the PH housing condition. Similarly in males, miR-376c-3p, -181d-5p, -712-5p, -186-5p, -21a-3p, -30d-3p, -495-3p, -669c-5p, -335-5p, -429-3p, -31-3p, and -217-5p were identified. Following Kyoto Encyclopedia of Genes and Genomes analysis, the identified miRNAs effected distinct subset of pathways within sexes. Interactional network analysis revealed miR-495-3p (male) and miR-34b-5p (female) as pivotal nodes that targeted the largest subset of genes. We identified several sex-specific miRNAs as candidate biomarkers for post-stroke SI in aged male and female mice. Additionally, these results suggest that there is potential to use plasma-based circulating miRNAs as a source of novel biomarkers to identify biological pathways involved in post-stroke SI.

摘要

社会隔离(SI)会增加缺血性损伤,并显著延迟实验性中风后的恢复。循环微小RNA(miRNA)的变化与包括中风在内的几种神经系统疾病有关。然而,尚不清楚哪些潜在生物标志物可阐明中风后隔离产生有害影响的潜在机制。将18至20个月大的C57BL/6雄性和雌性小鼠进行60分钟的大脑中动脉闭塞,随后再灌注,并在中风后立即将其分为隔离组(SI)或继续成对饲养组(PH)。在第15天,处死小鼠并收集血浆样本进行miRNA组分析。使用综合生物信息学鉴定了顶级候选miRNA及其生物学功能。miRNA组分析显示,两性共有21种差异表达的miRNA,其倍数变化为3或更高。在雌性队列中,相对于成对饲养条件,miR-206-3p、-376a-3p、-34b-5p、-133a-5p、-466f和-671-3p有高度变化。同样,在雄性中,鉴定出了miR-376c-3p、-181d-5p、-712-5p、-186-5p、-21a-3p、-30d-3p、-495-3p、-669c-5p、-335-5p、-429-3p、-31-3p和-217-5p。根据京都基因与基因组百科全书分析,鉴定出的miRNA在两性中影响不同的通路子集。相互作用网络分析显示,miR-495-3p(雄性)和miR-34b-5p(雌性)是靶向最大基因子集的关键节点。我们鉴定出几种性别特异性miRNA作为老年雄性和雌性小鼠中风后社会隔离的候选生物标志物。此外,这些结果表明,有可能将基于血浆的循环miRNA用作新型生物标志物的来源,以识别中风后社会隔离所涉及的生物学途径。