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野生型和实验室进化的生物膜过度产生菌株的比较基因组学。

Comparative genomics of wild-type and laboratory-evolved biofilm-overproducing strains.

机构信息

Laboratory of Molecular Environmental Microbiology, Department of Environmental Science and Ecological Engineering, Korea University, Seoul 02841, Republic of Korea.

EMBIOME, Seoho-ro, Gwonseon-gu, Suwon, Gyeonggi 16614, Republic of Korea.

出版信息

Microb Genom. 2020 Dec;6(12). doi: 10.1099/mgen.0.000464. Epub 2020 Nov 4.

Abstract

MA1002 was exposed to ultraviolet radiation to generate mutants with enhanced biofilm production. Two strains (nos 5 and 6) were then selected based on their high biofilm formation, as well as their possession of higher concentrations of extracellular matrix components (eDNA, protein and saccharides) than the wild-type (WT). Genomic sequencing revealed the presence of large genome deletions in a secondary chromosome in the mutants. Expression analyses of the WT and mutant strains indicated the upregulation of genes associated with exopolysaccharide synthesis and stress response. The mutant strains showed high mortality in glucose-supplemented (TYG) medium; however, cell death and biofilm formation were not increased in mutant cells grown under acetate- or glyoxylate-added media, suggesting that metabolic toxicity during glucose metabolism induced a high rate of cell death but improved biofilm formation in mutant strains. In damaged cells, eDNAs contributed to the enhanced biofilm formation of .

摘要

MA1002 暴露于紫外线下以产生具有增强生物膜生成能力的突变体。然后根据其高生物膜形成以及比野生型(WT)具有更高浓度的细胞外基质成分(eDNA、蛋白质和糖)选择了两种菌株(编号 5 和 6)。基因组测序显示突变体中次级染色体存在大片段基因组缺失。WT 和突变菌株的表达分析表明,与胞外多糖合成和应激反应相关的基因上调。突变菌株在添加葡萄糖的(TYG)培养基中表现出高死亡率;然而,在添加乙酸或乙醛酸盐的培养基中生长的突变细胞的细胞死亡和生物膜形成没有增加,这表明葡萄糖代谢过程中的代谢毒性诱导了高细胞死亡率,但改善了突变菌株的生物膜形成。在受损细胞中,eDNAs 有助于增强 的生物膜形成。

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