University of South Australia, Unisa STEM, SA 5000, Australia.
University of South Australia, UniSA Clinical and Health Sciences, SA 5000, Australia.
J Biomed Inform. 2020 Dec;112:103603. doi: 10.1016/j.jbi.2020.103603. Epub 2020 Oct 24.
As a medicine safety issue, Drug-Drug Interaction (DDI) may become an unexpected threat for causing Adverse Drug Events (ADEs). There is a growing demand for computational methods to efficiently and effectively analyse large-scale data to detect signals of Adverse Drug-drug Interactions (ADDIs). In this paper, we aim to detect high-quality signals of ADDIs which are non-spurious and non-redundant. We propose a new method which employs the framework of Bayesian network to infer the direct associations between the target ADE and medicines, and uses domain knowledge to facilitate the learning of Bayesian network structures. To improve efficiency and avoid redundancy, we design a level-wise algorithm with pruning strategy to search for high-quality ADDI signals. We have applied the proposed method to the United States Food and Drug Administration's (FDA) Adverse Event Reporting System (FAERS) data. The result shows that 54.45% of detected signals are verified as known DDIs and 10.89% were evaluated as high-quality ADDI signals, demonstrating that the proposed method could be a promising tool for ADDI signal detection.
作为一个药物安全问题,药物-药物相互作用(DDI)可能成为导致药物不良反应(ADE)的意外威胁。人们越来越需要计算方法来有效地分析大规模数据,以检测药物不良反应-药物相互作用(ADDIs)的信号。在本文中,我们旨在检测高质量的 ADDI 信号,这些信号是非虚假和非冗余的。我们提出了一种新的方法,该方法采用贝叶斯网络框架来推断目标 ADE 与药物之间的直接关联,并利用领域知识来促进贝叶斯网络结构的学习。为了提高效率和避免冗余,我们设计了一种带有剪枝策略的分层算法来搜索高质量的 ADDI 信号。我们已经将所提出的方法应用于美国食品和药物管理局(FDA)的不良事件报告系统(FAERS)数据。结果表明,检测到的信号中有 54.45%被验证为已知的 DDI,10.89%被评估为高质量的 ADDI 信号,这表明该方法可能是一种有前途的 ADDI 信号检测工具。