携带FOX-5β-内酰胺酶基因的大肠杆菌和肺炎克雷伯菌分离株的全基因组测序
Genome Sequencing of Escherichia coli and Klebsiella pneumoniae Isolates That Harbor the FOX-5 β-Lactamase Gene.
作者信息
Hazen Tracy H, Johnson J Kristie, Harris Anthony D, Rasko David A
机构信息
Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, USA.
Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, Maryland, USA.
出版信息
Microbiol Resour Announc. 2020 Nov 5;9(45):e01116-20. doi: 10.1128/MRA.01116-20.
Abstract
We generated draft genome assemblies of three and seven isolates that harbor the FOX-5 β-lactamase-encoding gene.
摘要
我们生成了三个携带FOX-5β-内酰胺酶编码基因的分离株和七个携带该基因的分离株的基因组草图组装。
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本文引用的文献
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Nucleic Acids Res. 2016 Aug 19;44(14):6614-24. doi: 10.1093/nar/gkw569. Epub 2016 Jun 24.
2
Comparative genomics of an IncA/C multidrug resistance plasmid from Escherichia coli and Klebsiella isolates from intensive care unit patients and the utility of whole-genome sequencing in health care settings.来自重症监护病房患者的大肠杆菌和克雷伯菌分离株中IncA/C多药耐药质粒的比较基因组学以及全基因组测序在医疗环境中的应用
Antimicrob Agents Chemother. 2014 Aug;58(8):4814-25. doi: 10.1128/AAC.02573-14. Epub 2014 Jun 9.
3
Trimmomatic: a flexible trimmer for Illumina sequence data.Trimmomatic：一款适用于 Illumina 测序数据的灵活修剪工具。
Bioinformatics. 2014 Aug 1;30(15):2114-20. doi: 10.1093/bioinformatics/btu170. Epub 2014 Apr 1.
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Antimicrob Agents Chemother. 2014;58(4):1879-88. doi: 10.1128/AAC.01605-13. Epub 2014 Jan 6.
5
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