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从分离到应用的生物活性链霉菌:塔斯马尼亚马铃薯农场实例。

Bioactive Streptomycetes from Isolation to Applications: A Tasmanian Potato Farm Example.

机构信息

GeneCology Research Centre and the School of Science and Engineering, University of the Sunshine Coast, Maroochydore DC, QLD, Australia.

Terragen Biotech Pty. Ltd., Coolum Beach, QLD, Australia.

出版信息

Methods Mol Biol. 2021;2232:219-249. doi: 10.1007/978-1-0716-1040-4_18.

Abstract

The genus Streptomyces constitutes approximately 50% of all soil actinomycetes, playing a significant role in the soil microbial community through vital functions including nutrient cycling, production of bioactive metabolites, disease-suppression and plant growth promotion. Streptomyces produce many bioactive compounds and are prime targets for industrial and biotechnological applications. In addition to their agrobiological roles, some Streptomyces spp. can, however, be phytopathogenic, examples include, common scab of potato that causes economic losses worldwide. Currently used chemical control measures can have detrimental effect to environmental and human health as a result alternative methods to chemical disease control are being investigated. One alternative is the use of streptomycete specific phages to remove this pathogenic bacterium before it can cause the disease on potatoes. However, due to co-existence of non-common scab-causing species belonging to the genus Streptomyces, phage treatment is likely to affect a wide range of non-target streptomycete species including the beneficial ones in the soil. Therefore, before such treatment starts the host range of the phages within the targeted family of bacteria should be determined. In a study conducted using soil samples from a Tasmanian potato farm, streptomycetes were isolated and tested against streptomycete-specific phages. Their antifungal activity was also determined using multiple assays against selected phytopathogens. The four strongest antifungal activity-displaying isolates were further tested for their persistent antifungal activity using wheat and Fusarium solani in a pot trial. A second pot trial was also conducted to evaluate whether the beneficial streptomycetes were affected by streptophage treatment and whether their removal via the phage battery would cause opportunistic fungal infections to plants in soil. The streptomycetes prevented the reduction in wheat shoot weight caused by F. solani indicating their disease suppressive effect. However, when phages were added into the pots, the growth of wheat was detrimentally impacted. This finding might suggest that the reduced presence of antifungal streptomycetes via phage-induced lysis might encourage opportunistic fungal infections in plants.

摘要

链霉菌属约占土壤放线菌的 50%,通过养分循环、生物活性代谢产物的产生、疾病抑制和植物生长促进等重要功能,在土壤微生物群落中发挥着重要作用。链霉菌产生许多生物活性化合物,是工业和生物技术应用的主要目标。除了它们的农业生物学作用外,一些链霉菌物种也可能是植物病原体,例如,引起全球经济损失的马铃薯普通疮痂病。由于目前使用的化学控制措施可能对环境和人类健康造成不利影响,因此正在研究替代化学疾病控制的方法。一种替代方法是使用链霉菌特异性噬菌体在其引起马铃薯疾病之前去除这种致病菌。然而,由于非普通疮痂致病物种与链霉菌属共同存在,噬菌体处理可能会影响包括土壤中有益物种在内的广泛的非目标链霉菌物种。因此,在开始这种治疗之前,应该确定噬菌体在目标细菌家族中的宿主范围。在一项使用塔斯马尼亚马铃薯农场土壤样本进行的研究中,从土壤中分离出链霉菌并对抗链霉菌特异性噬菌体进行了测试。还使用多种针对选定植物病原体的测定方法测定了它们的抗真菌活性。进一步对显示出最强抗真菌活性的四个分离物进行了小麦和镰刀菌的持久性抗真菌活性测试在盆栽试验中。还进行了第二次盆栽试验,以评估有益的链霉菌是否会受到链霉菌噬菌体处理的影响,以及通过噬菌体电池将其去除是否会导致土壤中植物的机会性真菌感染。链霉菌防止了镰刀菌引起的小麦茎重减少,表明它们具有抑制疾病的作用。然而,当噬菌体被添加到花盆中时,小麦的生长受到了不利影响。这一发现可能表明,通过噬菌体诱导的裂解减少了具有抗真菌作用的链霉菌,可能会鼓励植物中的机会性真菌感染。

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