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在特定系统中对噬菌体T3 DNA体外包装反应的表征。

Characterization of the bacteriophage T3 DNA packaging reaction in vitro in a defined system.

作者信息

Shibata H, Fujisawa H, Minagawa T

机构信息

Department of Botany, Faculty of Science, Kyoto University, Japan.

出版信息

J Mol Biol. 1987 Aug 20;196(4):845-51. doi: 10.1016/0022-2836(87)90409-8.

Abstract

The bacteriophage T3 DNA packaging system in vitro defined here is composed of purified proheads and two non-capsid proteins, the products of genes 18 and 19 (gp18 and gp19). In this system, a precursor complex (50 S complex) accumulates in the presence of adenosine 5'-O-(3'-thiotriphosphate) (ATP-gamma-S), a non-hydrolyzable analog of ATP. The 50 S complex is converted to a filled head in the presence of ATP. The conversion of the 50 S complex, formed by preincubation with ATP-gamma-S, to the mature head proceeds in a synchronous manner after the addition of ATP. The lag time for formation of mature heads from the 50 S complex is 1.8, 4.5 and 6.8 minutes at 30, 25 and 20 degrees C, respectively. DNA is translocated into the capsid at a constant rate of 5.7 x 10(3) base-pairs per minute at 20 degrees C. The conversion of the 50 S complex to the mature head exhibits a sigmoidal relationship with respect to the concentration of ATP, the concentration for half-maximal activity being about 20 microM. The transition of the prohead to the expanded capsid occurs at 20 degrees C at one minute 40 seconds after the initiation of DNA translocation, when one-fourth of the genome has been packaged into a prohead. At the same time, the capsid-DNA complex becomes stable to high concentrations of salt. When DNA translocation is interrupted by the addition of ATP-gamma-S, packaged DNA exists at 0 degrees C as well as at 20 degrees C but the exit of DNA stops after one-third of the genome is inside the capsid. After exit, DNA is retranslocated into the expanded capsid by the addition of ATP at a rate of about 5.7 x 10(3) base-pairs per minute at 20 degrees C. The decrease in concentration of ATP interrupts DNA translocation into the capsid but does not induce DNA exit. Interrupted DNA translocation may be reinitiated by the addition of ATP. DNA exit is not induced by the addition of ATP-gamma-S to mature heads or partially filled heads pretreated with DNase.

摘要

此处定义的体外噬菌体T3 DNA包装系统由纯化的原头部和两种非衣壳蛋白(基因18和19的产物,即gp18和gp19)组成。在该系统中,在腺苷5'-O-(3'-硫代三磷酸)(ATP-γ-S,一种ATP的不可水解类似物)存在的情况下,会积累一种前体复合物(50S复合物)。在ATP存在的情况下,50S复合物会转变为充满DNA的头部。由ATP-γ-S预孵育形成的50S复合物在添加ATP后以同步方式转变为成熟头部。在30、25和20℃下,从50S复合物形成成熟头部的延迟时间分别为1.8、4.5和6.8分钟。在20℃下,DNA以每分钟5.7×10(3)个碱基对的恒定速率转运到衣壳中。50S复合物向成熟头部的转变与ATP浓度呈现S形关系,半最大活性浓度约为20μM。原头部向扩展衣壳的转变在20℃下于DNA转运开始后1分40秒发生,此时基因组的四分之一已被包装到原头部中。同时,衣壳-DNA复合物对高浓度盐变得稳定。当通过添加ATP-γ-S中断DNA转运时,在0℃和20℃下都存在已包装的DNA,但在基因组的三分之一进入衣壳后DNA的输出停止。输出后,通过在20℃下添加ATP,DNA以约每分钟5.7×10(3)个碱基对的速率重新转运到扩展衣壳中。ATP浓度的降低会中断DNA向衣壳中的转运,但不会诱导DNA输出。添加ATP可重新启动中断的DNA转运。向用DNase预处理的成熟头部或部分填充头部添加ATP-γ-S不会诱导DNA输出。

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