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[三维染色体构象捕获及其衍生技术]

[Three-dimensional chromosome conformation capture and its derived technologies].

作者信息

Tian Hao, Yang Zijian, Xu Xingwen, Liu Liangyu

机构信息

Key Laboratory of Plant Gene Resources and Biotechnology for Carbon Reduction and Environmental Improvement, College of Life Sciences, Capital Normal University, Beijing 100048, China.

出版信息

Sheng Wu Gong Cheng Xue Bao. 2020 Oct 25;36(10):2040-2050. doi: 10.13345/j.cjb.200112.

Abstract

Linear chromatin is compacted into eukaryotic nucleus through a complex and multi-layered architecture. Consequently, chromatin conformation in a local or long-distance manner is strongly correlated with gene expression. Chromosome conformation capture (3C) technology, together with its variants like 4C/5C/Hi-C, has been well developed to study chromatin looping and whole genome structure. In this review, we introduce new technologies including chromosome capture combined with immunoprecipitation, nuclei acid-based hybridization, single cell and genome sequencing, as well as their application.

摘要

线性染色质通过复杂的多层结构被压缩进真核细胞核中。因此,局部或远距离的染色质构象与基因表达密切相关。染色体构象捕获(3C)技术及其变体如4C/5C/Hi-C已得到充分发展,用于研究染色质环化和全基因组结构。在本综述中,我们介绍了包括染色体捕获结合免疫沉淀、基于核酸的杂交、单细胞和基因组测序在内的新技术及其应用。

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