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家鸽肉质性状的基因表达与遗传关联 ()。

gene expression and genetic association with meat quality traits in domestic pigeons ().

机构信息

Animal Science College, Zhejiang University, Hangzhou, China.

出版信息

Br Poult Sci. 2021 Apr;62(2):172-179. doi: 10.1080/00071668.2020.1839016. Epub 2021 Feb 8.

Abstract
  1. H-FABP (heart-type fatty acid-binding protein) is an important fatty acid-binding protein that participates in the metabolism and intracellular transportation of lipids. This study was designed to study the gene expression and genetic association with meat quality traits in domestic pigeons.2. The spatio-temporal expression patterns showed that was widely expressed in all eleven tissues in birds from hatching to 4 weeks of age, and the expression level in the liver was the highest, and spleen and subcutaneous fat showed relatively high levels at all time points, and increased markedly as squabs became older.3. Nine novel SNPs were found; three of them (g.42 C > T and g.123 C > T in exon 1 and g.3128 C > T in exon 2) were synonymous mutations, and six of them (g.3304 T > C, g.3305 G > A, g.3313A>G, g.3343 C > T, g.3372A>C, g.3410 T > C in exon 3) were located in the 3' untranslated region (UTR). In addition, four haplotypes and six diplotypes were formed and showed weak linkage disequilibrium. Association analysis showed that in the SNP of g.3305 G > A, the AB genotype showed higher (P < 0.05) inosinic acid concentrations in breast muscle than the BB genotype. In the SNP of g.3313A>G, the AA and AB genotypes showed significantly higher (P < 0.01) inosinic acid concentrations than the BB genotype, AA showed the highest intramuscular fat content, and the relative mRNA expression level of the AA genotype was the highest (P < 0.05).4. Association analysis of diplotypes showed no correlation with meat quality traits. Moreover, correlation analysis indicated that the mRNA expression level was tightly related to intramuscular fat content (P < 0.01).5. This study suggested that the gene may be a candidate gene in marker-assisted selection of pigeons for high-quality meat.
摘要
  1. H-FABP(心脏型脂肪酸结合蛋白)是一种重要的脂肪酸结合蛋白,参与脂质的代谢和细胞内运输。本研究旨在研究家鸽肉质性状的基因表达和遗传关联。

  2. 时空表达模式表明,从孵化到 4 周龄的鸟类所有 11 种组织中广泛表达,肝脏表达水平最高,脾脏和皮下脂肪在所有时间点均表现出相对较高的水平,并随着乳鸽年龄的增长而显著增加。

  3. 发现了 9 个新的 SNP;其中 3 个(外显子 1 中的 g.42C>T 和 g.123C>T 以及外显子 2 中的 g.3128C>T)为同义突变,其中 6 个(g.3304T>C、g.3305G>A、g.3313A>G、g.3343C>T、g.3372A>C、g.3410T>C 位于 3'非翻译区(UTR)。此外,形成了四个单倍型和六个双单倍型,表现出较弱的连锁不平衡。关联分析表明,在 SNP 的 g.3305G>A 中,AB 基因型比 BB 基因型在胸肌中的肌苷酸浓度更高(P<0.05)。在 SNP 的 g.3313A>G 中,AA 和 AB 基因型的肌苷酸浓度显著高于 BB 基因型(P<0.01),AA 型的肌内脂肪含量最高,AA 型的相对 mRNA 表达水平最高(P<0.05)。

  4. 双单倍型的关联分析与肉质性状无相关性。此外,相关性分析表明,mRNA 表达水平与肌内脂肪含量密切相关(P<0.01)。

  5. 本研究表明,基因可能是家鸽优质肉质辅助选择的候选基因。

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