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基因组资源:2020 年美国天竺葵引种中来自 II 型表型、序列 1(第 3 型、生物型 2)菌株 UW848。

Genome Resource: Phylotype II Sequevar 1 (Race 3 Biovar 2) Strain UW848 From the 2020 U.S. Geranium Introduction.

机构信息

Department of Plant Pathology, The Ohio State University, Columbus, OH.

Infectious Disease Institute, The Ohio State University, Columbus, OH.

出版信息

Plant Dis. 2021 Jan;105(1):207-208. doi: 10.1094/PDIS-06-20-1269-A. Epub 2020 Nov 11.

Abstract

phylotype II sequevar 1 (II-1, formerly race 3 biovar 2) causes tomato bacterial wilt, potato brown rot, and Southern wilt of geranium. Strains in II-1 cause wilting in potato and tomato at cooler temperatures than tropical lowland strains. Although periodically introduced, II-1 has not established in the United States. This pathogen is of quarantine concern and listed as a Federal Select Agent. We report a rapidly sequenced (<2 days) draft genome of UW848, a II-1 isolate introduced to the United States in geranium cuttings in spring 2020. UW848 belongs to the near-clonal cluster of II-1 global pandemic strains.

摘要

phylotype II sequevar 1(II-1,前身为 3 号种生物型 2)引起番茄细菌性萎蔫病、马铃薯褐腐病和天竺葵南方萎蔫病。II-1 中的菌株在比热带低地菌株更低的温度下引起马铃薯和番茄萎蔫。尽管周期性引入,但 II-1 尚未在美国建立。该病原体是检疫关注的对象,并被列为联邦选择剂。我们报告了 UW848 的快速测序(<2 天)草案基因组,UW848 是 2020 年春季引入美国天竺葵插条的 II-1 分离株。UW848 属于 II-1 全球大流行菌株的近克隆群。

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