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提高重组人肾酶的可溶性表达和应用。

Improved soluble expression and use of recombinant human renalase.

机构信息

Department of Chemical and Biological Engineering, Rensselaer Polytechnic Institute, Troy, New York, United States of America.

Center for Biotechnology and Interdisciplinary Studies, Rensselaer Polytechnic Institute, Troy, New York, United States of America.

出版信息

PLoS One. 2020 Nov 12;15(11):e0242109. doi: 10.1371/journal.pone.0242109. eCollection 2020.

DOI:10.1371/journal.pone.0242109
PMID:33180865
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7660482/
Abstract

Electrochemical bioreactor systems have enjoyed significant attention in the past few decades, particularly because of their applications to biobatteries, artificial photosynthetic systems, and microbial electrosynthesis. A key opportunity with electrochemical bioreactors is the ability to employ cofactor regeneration strategies critical in oxidative and reductive enzymatic and cell-based biotransformations. Electrochemical cofactor regeneration presents several advantages over other current cofactor regeneration systems, such as chemoenzymatic multi-enzyme reactions, because there is no need for a sacrificial substrate and a recycling enzyme. Additionally, process monitoring is simpler and downstream processing is less costly. However, the direct electrochemical reduction of NAD(P)+ on a cathode may produce adventitious side products, including isomers of NAD(P)H that can act as potent competitive inhibitors to NAD(P)H-requiring enzymes such as dehydrogenases. To overcome this limitation, we examined how nature addresses the adventitious formation of isomers of NAD(P)H. Specifically, renalases are enzymes that catalyze the oxidation of 1,2- and 1,6-NAD(P)H to NAD(P)+, yielding an effective recycling of unproductive NAD(P)H isomers. We designed several mutants of recombinant human renalase isoform 1 (rhRen1), expressed them in E. coli BL21(DE3) to enhance protein solubility, and evaluated the activity profiles of the renalase variants against NAD(P)H isomers. The potential for rhRen1 to be employed in engineering applications was then assessed in view of the enzyme's stability upon immobilization. Finally, comparative modeling was performed to assess the underlying reasons for the enhanced solubility and activity of the mutant enzymes.

摘要

电化学生物反应器系统在过去几十年中受到了广泛关注,特别是因为它们在生物电池、人工光合作用系统和微生物电合成中的应用。电化学生物反应器的一个关键机会是能够采用辅酶再生策略,这些策略在氧化和还原酶促及基于细胞的生物转化中至关重要。与其他当前的辅酶再生系统(如化学酶多酶反应)相比,电化学辅酶再生具有几个优势,因为不需要牺牲底物和循环酶。此外,过程监测更简单,下游处理成本更低。然而,NAD(P)+在阴极上的直接电化学还原可能会产生偶然的副产物,包括 NAD(P)H 的异构体,这些异构体可能作为 NAD(P)H 依赖性酶(如脱氢酶)的有效抑制剂。为了克服这一限制,我们研究了自然界如何解决 NAD(P)H 异构体的偶然形成问题。具体来说,肾酶是一种能够催化 1,2-和 1,6-NAD(P)H 氧化为 NAD(P)+的酶,从而有效地循环利用无生产能力的 NAD(P)H 异构体。我们设计了几种重组人肾酶同工酶 1(rhRen1)的突变体,在大肠杆菌 BL21(DE3)中表达,以提高蛋白质的可溶性,并评估了肾酶变体对 NAD(P)H 异构体的活性谱。然后,根据酶在固定化后的稳定性来评估 rhRen1 在工程应用中的潜力。最后,进行了比较建模,以评估突变酶可溶性和活性增强的潜在原因。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1688/7660482/5911ff433d21/pone.0242109.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1688/7660482/f3eb903731d0/pone.0242109.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1688/7660482/2d151840c92d/pone.0242109.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1688/7660482/3d96b34edc4b/pone.0242109.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1688/7660482/7f5ee6ccef53/pone.0242109.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1688/7660482/9b43e7f9ceb1/pone.0242109.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1688/7660482/2435123613c3/pone.0242109.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1688/7660482/5911ff433d21/pone.0242109.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1688/7660482/f3eb903731d0/pone.0242109.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1688/7660482/2d151840c92d/pone.0242109.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1688/7660482/3d96b34edc4b/pone.0242109.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1688/7660482/7f5ee6ccef53/pone.0242109.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1688/7660482/9b43e7f9ceb1/pone.0242109.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1688/7660482/2435123613c3/pone.0242109.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1688/7660482/5911ff433d21/pone.0242109.g007.jpg

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本文引用的文献

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Adv Appl Microbiol. 2018;105:51-86. doi: 10.1016/bs.aambs.2018.07.001. Epub 2018 Sep 6.
2
Improved strategies for electrochemical 1,4-NAD(P)H regeneration: A new era of bioreactors for industrial biocatalysis.电化学 1,4-NAD(P)H 再生的改进策略:工业生物催化用生物反应器的新纪元。
Biotechnol Adv. 2018 Jan-Feb;36(1):120-131. doi: 10.1016/j.biotechadv.2017.10.003. Epub 2017 Oct 10.
3
Automated Structure- and Sequence-Based Design of Proteins for High Bacterial Expression and Stability.
肾酶:一种具有胃肠道疾病作用的多功能信号分子。
Cells. 2021 Aug 6;10(8):2006. doi: 10.3390/cells10082006.
基于结构和序列的蛋白质自动化设计,以实现高效细菌表达和稳定性
Mol Cell. 2016 Jul 21;63(2):337-346. doi: 10.1016/j.molcel.2016.06.012. Epub 2016 Jul 14.
4
Bacterial Renalase: Structure and Kinetics of an Enzyme with 2- and 6-Dihydro-β-NAD(P) Oxidase Activity from Pseudomonas phaseolicola.细菌肾酶:来自花生假单胞菌的具有 2-和 6-二氢-β-NAD(P)氧化酶活性的一种酶的结构和动力学。
Biochemistry. 2015 Jun 23;54(24):3791-802. doi: 10.1021/acs.biochem.5b00451. Epub 2015 Jun 9.
5
The catalytic function of renalase: A decade of phantoms.肾酶的催化功能:十年幻影。
Biochim Biophys Acta. 2016 Jan;1864(1):177-86. doi: 10.1016/j.bbapap.2015.04.010. Epub 2015 Apr 18.
6
Metabolic function for human renalase: oxidation of isomeric forms of β-NAD(P)H that are inhibitory to primary metabolism.人肾酶的代谢功能:对初级代谢有抑制作用的β-NAD(P)H异构体的氧化。
Biochemistry. 2015 Jan 27;54(3):795-806. doi: 10.1021/bi5013436. Epub 2015 Jan 8.
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Renalase is an α-NAD(P)H oxidase/anomerase.肾酶是一种 α-NAD(P)H 氧化酶/差向异构酶。
J Am Chem Soc. 2013 Sep 18;135(37):13980-7. doi: 10.1021/ja407384h. Epub 2013 Sep 5.
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Renalase lowers ambulatory blood pressure by metabolizing circulating adrenaline.肾酶通过代谢循环中的肾上腺素降低动态血压。
J Am Heart Assoc. 2012 Aug;1(4):e002634. doi: 10.1161/JAHA.112.002634. Epub 2012 Aug 24.
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Host cell and expression engineering for development of an E. coli ketoreductase catalyst: enhancement of formate dehydrogenase activity for regeneration of NADH.用于开发大肠杆菌酮还原酶催化剂的宿主细胞和表达工程:增强甲酸脱氢酶活性以再生 NADH。
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Synthesis of human renalase1 in Escherichia coli and its purification as a FAD-containing holoprotein.人肾酶1在大肠杆菌中的合成及其作为含黄素腺嘌呤二核苷酸全蛋白的纯化。
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