大规模死亡事件后从普通燕鸥雏鸟中分离出的非O1、非O139型霍乱弧菌的基因组序列草图
Draft Genome Sequences of Vibrio cholerae Non-O1, Non-O139 Isolates from Common Tern Chicks () following a Mass Mortality Event.
作者信息
Strauch Eckhard, Jäckel Claudia, Hammerl Jens Andre, Hennig Veit, Roschanski Nicole, Dammann Insa
机构信息
German Federal Institute for Risk Assessment, Department of Biological Safety, Berlin, Germany
German Federal Institute for Risk Assessment, Department of Biological Safety, Berlin, Germany.
出版信息
Microbiol Resour Announc. 2020 Nov 12;9(46):e01053-20. doi: 10.1128/MRA.01053-20.
Abstract
is an inhabitant of aquatic environments worldwide. Here, we report the draft genome sequences of eight non-O1, non-O139 isolates that were recovered from the corpses of two seabird chicks (common terns) following a mass mortality event in a German breeding colony in 2019.
摘要
是一种遍布全球水生环境的生物。在此，我们报告了8株非O1、非O139分离株的基因组草图序列，这些分离株是在2019年德国一个繁殖地发生大规模死亡事件后，从两只海鸟雏鸟（普通燕鸥）的尸体中分离得到的。
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Microorganisms. 2020 May 15;8(5):739. doi: 10.3390/microorganisms8050739.
2
Accumulating evidence suggests that some waterbird species are potential vectors of Vibrio cholerae.
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3
Carbapenemase VCC-1-Producing Vibrio cholerae in Coastal Waters of Germany.
Emerg Infect Dis. 2017 Oct;23(10):1735-1737. doi: 10.3201/eid2310.161625.
4
Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center.
Nucleic Acids Res. 2017 Jan 4;45(D1):D535-D542. doi: 10.1093/nar/gkw1017. Epub 2016 Nov 29.
5
NCBI prokaryotic genome annotation pipeline.
Nucleic Acids Res. 2016 Aug 19;44(14):6614-24. doi: 10.1093/nar/gkw569. Epub 2016 Jun 24.
6
PHASTER: a better, faster version of the PHAST phage search tool.
Nucleic Acids Res. 2016 Jul 8;44(W1):W16-21. doi: 10.1093/nar/gkw387. Epub 2016 May 3.
7
Genomic analysis of ICEVchBan8: An atypical genetic element in Vibrio cholerae.
FEBS Lett. 2012 Jun 4;586(11):1617-21. doi: 10.1016/j.febslet.2012.03.064. Epub 2012 Apr 18.
8
Genomic sequence and receptor for the Vibrio cholerae phage KSF-1phi: evolutionary divergence among filamentous vibriophages mediating lateral gene transfer.
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9
Characterization of the major control region of Vibrio cholerae bacteriophage K139: immunity, exclusion, and integration.
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10
The incidence of Vibrio cholerae in water, animals and birds in Kent, England.
J Appl Bacteriol. 1982 Apr;52(2):281-91. doi: 10.1111/j.1365-2672.1982.tb04852.x.
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