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预测胰腺腺癌辅助吉西他滨敏感性的转录组学特征。

A transcriptomic signature to predict adjuvant gemcitabine sensitivity in pancreatic adenocarcinoma.

机构信息

Tumour Identity Card Program (CIT), French League Against Cancer, Paris, France.

Cancer Research Center of Marseille, CRCM, Inserm, CNRS, Paoli-Calmettes Institut, Aix-Marseille University, Marseille, France.

出版信息

Ann Oncol. 2021 Feb;32(2):250-260. doi: 10.1016/j.annonc.2020.10.601. Epub 2020 Nov 12.

Abstract

BACKGROUND

Chemotherapy is the only systemic treatment approved for pancreatic ductal adenocarcinoma (PDAC), with a selection of regimens based on patients' performance status and expected efficacy. The establishment of a potent stratification associated with chemotherapeutic efficacy could potentially improve prognosis by tailoring treatments.

PATIENTS AND METHODS

Concomitant chemosensitivity and genome-wide RNA profiles were carried out on preclinical models (primary cell cultures and patient-derived xenografts) derived from patients with PDAC included in the PaCaOmics program (NCT01692873). The RNA-based stratification was tested in a monocentric cohort and validated in a multicentric cohort, both retrospectively collected from resected PDAC samples (67 and 368 patients, respectively). Forty-three (65%) and 203 (55%) patients received adjuvant gemcitabine in the monocentric and the multicentric cohorts, respectively. The relationships between predicted gemcitabine sensitivity and patients' overall survival (OS) and disease-free survival were investigated.

RESULTS

The GemPred RNA signature was derived from preclinical models, defining gemcitabine sensitive PDAC as GemPred+. Among the patients who received gemcitabine in the test and validation cohorts, the GemPred+ patients had a higher OS than GemPred- (P = 0.046 and P = 0.00216). In both cohorts, the GemPred stratification was not associated with OS among patients who did not receive gemcitabine. Among gemcitabine-treated patients, GemPred+ patients had significantly higher OS than the GemPred-: 91.3 months [95% confidence interval (CI): 61.2-not reached] versus 33 months (95% CI: 24-35.2); hazard ratio 0.403 (95% CI: 0.221-0.735, P = 0.00216). The interaction test for gemcitabine and GemPred+ stratification was significant (P = 0.0245). Multivariate analysis in the gemcitabine-treated population retained an independent predictive value.

CONCLUSION

The RNA-based GemPred stratification predicts the benefit of adjuvant gemcitabine in PDAC patients.

摘要

背景

化疗是唯一被批准用于胰腺导管腺癌(PDAC)的全身治疗方法,根据患者的体能状态和预期疗效选择方案。建立与化疗疗效相关的有效分层方法,通过量身定制治疗方法,有可能改善预后。

患者和方法

在 PaCaOmics 计划中纳入的 PDAC 患者的临床前模型(原代细胞培养物和患者来源的异种移植物)上进行了同时的化疗敏感性和全基因组 RNA 谱分析(NCT01692873)。在单中心队列中进行了基于 RNA 的分层测试,并在回顾性收集的切除 PDAC 样本的多中心队列中进行了验证(分别为 67 例和 368 例)。在单中心和多中心队列中,分别有 43(65%)和 203(55%)例患者接受了辅助 gemcitabine 治疗。研究了预测 gemcitabine 敏感性与患者总生存期(OS)和无病生存期之间的关系。

结果

GemPred RNA 特征来自临床前模型,将 gemcitabine 敏感的 PDAC 定义为 GemPred+。在接受测试和验证队列中 gemcitabine 治疗的患者中,GemPred+患者的 OS 高于 GemPred-(P=0.046 和 P=0.00216)。在两个队列中,在未接受 gemcitabine 治疗的患者中,GemPred 分层与 OS 无关。在接受 gemcitabine 治疗的患者中,GemPred+患者的 OS 显著高于 GemPred-:91.3 个月[95%置信区间(CI):61.2-未达到]与 33 个月(95%CI:24-35.2);风险比 0.403(95%CI:0.221-0.735,P=0.00216)。gemcitabine 和 GemPred+分层的交互检验具有统计学意义(P=0.0245)。在接受 gemcitabine 治疗的人群中,多变量分析保留了独立的预测价值。

结论

基于 RNA 的 GemPred 分层预测了辅助 gemcitabine 在 PDAC 患者中的获益。

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