Zhang Jiemei, Yao Zhengping, Zhang Renjun, Mou Zongmin, Yin Honghui, Xu Tianyang, Zhao Dake, Chen Suiyun
Biocontrol Engineering Research Center of Plant Disease and Pest, Biocontrol Engineering Research Center of Crop Disease and Pest, Yunnan University, Kunming, China.
School of Life Sciences, Yunnan University, Kunming, China.
Front Genet. 2020 Oct 27;11:591984. doi: 10.3389/fgene.2020.591984. eCollection 2020.
Melatonin plays key roles in development and confers stress tolerance to plants. Serotonin -acetyltransferase (SNAT) is either the enzyme involved in the last step or the penultimate enzyme of phytomelatonin biosynthesis. To date, genes have not been characterized in tobacco (), an economically important plant species. The sequence of the Acetyltransf_7 conserved domain was used as a query sequence, and 12 candidate genes were in turn identified in the genome of tobacco. These s could be divided into two groups based on the phylogenetic tree. and clustered together with the other typical s, but the other 10 s separately clustered outside of the typical s. These 10 s have only motif 1, whereas representative s, such as and or a from cyanobacteria, have five motifs. In addition, and are highly homologous to the characterized , 62.95 and 71.36%, respectively; however, the homology between the other 10 genes and is low. Concomitantly, it is hypothesized that and are the homolog of , whereas the other 10 candidates could be considered -like genes. Furthermore, both and , two diploid ancestor species of , have two candidates; therefore, it is speculated that gene rearrangement or deletion during the process of genomic stabilization after whole-genome duplication or polyploidization led to the preservation of and during the evolution of tobacco from the ancestral diploid to the allotetraploid. and -like genes were differentially expressed in all organs under different stress conditions, indicating that these genes potentially associated with plant growth and development and stress resistance. Under different stress conditions, the expression of was significantly upregulated upon high-temperature and cadmium stresses, while the expression of did not significantly increase under any of the tested stress treatments. These results provide valuable information for elucidating the evolutionary relationship of genes in tobacco and genetic resources for improving tobacco production in the future.
褪黑素在植物发育中起关键作用,并赋予植物抗逆性。血清素 - 乙酰转移酶(SNAT)是植物褪黑素生物合成最后一步或倒数第二步所涉及的酶。迄今为止,在经济上重要的植物烟草(Nicotiana tabacum)中尚未对该基因进行表征。以乙酰转移酶_7保守结构域的序列作为查询序列,进而在烟草基因组中鉴定出12个候选基因。根据系统发育树,这些基因可分为两组。NtSNAT1和NtSNAT2与其他典型的SNAT聚集在一起,但另外10个基因分别聚集在典型SNAT之外。这10个基因只有基序1,而代表性的SNAT,如来自拟南芥的SNAT1和SNAT2或来自蓝细菌的一个SNAT,有五个基序。此外,NtSNAT1和NtSNAT2分别与已表征的SNAT高度同源,同源性分别为62.95%和71.36%;然而,其他10个SNAT基因与SNAT的同源性较低。同时,推测NtSNAT1和NtSNAT2是SNAT的同源物,而其他10个候选基因可被视为SNAT样基因。此外,烟草的两个二倍体祖先物种绒毛状烟草(N. tomentosiformis)和林烟草(N. sylvestris)都有两个SNAT候选基因;因此,推测在全基因组复制或多倍化后基因组稳定过程中的基因重排或缺失导致了在烟草从祖先二倍体进化到异源四倍体的过程中NtSNAT1和NtSNAT2得以保留。NtSNAT1和SNAT样基因在不同胁迫条件下在所有器官中差异表达,表明这些基因可能与植物生长发育和抗逆性相关。在不同胁迫条件下,NtSNAT1的表达在高温和镉胁迫下显著上调,而NtSNAT2的表达在任何测试的胁迫处理下均未显著增加。这些结果为阐明烟草中SNAT基因的进化关系提供了有价值的信息,并为未来提高烟草产量提供了遗传资源。