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Comparative reactivity analysis of small-molecule thiol surrogates.小分子巯基替代物的比较反应性分析。
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Emerging and Re-Emerging Warheads for Targeted Covalent Inhibitors: Applications in Medicinal Chemistry and Chemical Biology.新兴与重现的靶向共价抑制剂弹头:在药物化学和化学生物学中的应用。
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具有可调α-亚甲基-γ-内酰胺亲电试剂的愈创木烷内酯类似物的合成及其与巯基反应活性的相关性生物活性。

Synthesis of Guaianolide Analogues with a Tunable α-Methylene-γ-lactam Electrophile and Correlating Bioactivity with Thiol Reactivity.

机构信息

Department of Chemistry, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, United States.

Department of Medicinal Chemistry, University of Minnesota, Minneapolis, Minnesota 55455, United States.

出版信息

J Med Chem. 2020 Dec 10;63(23):14951-14978. doi: 10.1021/acs.jmedchem.0c01464. Epub 2020 Nov 17.

DOI:10.1021/acs.jmedchem.0c01464
PMID:33201697
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8877724/
Abstract

α-Methylene-γ-lactones are present in ∼3% of known natural products, and compounds comprising this motif display a range of biological activities. However, this reactive lactone limits informed structure-activity relationships for these bioactive molecules. Herein, we describe chemically tuning the electrophilicity of the α-methylene-γ-lactone by replacement with an α-methylene-γ-lactam. Guaianolide analogues having α-methylene-γ-lactams are synthesized using the allenic Pauson-Khand reaction. Substitution of the lactam nitrogen with electronically different groups affords diverse thiol reactivity. Cellular NF-κB inhibition assays for these lactams were benchmarked against parthenolide and a synthetic α-methylene-γ-lactone showing a positive correlation between thiol reactivity and bioactivity. Cytotoxicity assays show good correlation at the outer limits of thiol reactivity but less so for compounds with intermediate reactivity. A La assay to detect reactive molecules by nuclear magnetic resonance and mass spectrometry peptide sequencing assays with the La antigen protein demonstrate that lactam analogues with muted nonspecific thiol reactivities constitute a better electrophile for rational chemical probe and therapeutic molecule design.

摘要

α-亚甲基-γ-内酰胺存在于约 3%的已知天然产物中,包含该结构的化合物表现出多种生物活性。然而,这种反应性内酯限制了这些生物活性分子的信息丰富的结构-活性关系。在此,我们通过用α-亚甲基-γ-内酰胺取代来化学调节α-亚甲基-γ-内酰胺的亲电性。使用烯丙基 Pauson-Khand 反应合成具有α-亚甲基-γ-内酰胺的愈创木烷类似物。用具有不同电子性质的基团取代内酰胺氮,可获得不同的硫醇反应性。对这些内酰胺的细胞 NF-κB 抑制测定与小白菊内酯和合成的α-亚甲基-γ-内酰胺进行了基准测试,结果表明硫醇反应性与生物活性之间存在正相关。细胞毒性测定在硫醇反应性的外限处显示出良好的相关性,但对于具有中等反应性的化合物则相关性较差。通过核磁共振和质谱肽测序测定 La 抗原蛋白的 La 测定法来检测反应性分子,证明具有低非特异性硫醇反应性的内酰胺类似物构成了更合适的亲电试剂,用于合理的化学探针和治疗分子设计。

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